PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu045260.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 194aa MW: 20400.8 Da PI: 9.2869

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu045260.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125	7.9e-39	34	141	3	112
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...kaaksaaks 97 +kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a++ ++ s +++ + +aa+s++++ Oeu045260.1 34 VKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFG----QVWSFAAPPGEmvvAAAASNNPQ 127 79*************************************************************99999554....22222222222342333333333 PP TCP 98 kksqksaasalnlak 112 +++q+++a l + + Oeu045260.1 128 QQQQQPSA-SLRFLQ 141 33333333.333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MSTSAADGNG DEGAIIDPSQ KAGVDGNNNG ALVVKKPPAK DRHSKVDGRG RRIRMPIICA 60 ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP ANFGQVWSFA APPGEMVVAA 120 AASNNPQQQQ QQPSASLRFL QQQQPLGMGE ASAARVGNYL PIAQVQGHHL NLLASLSGHP 180 PQSSEQRREG DAN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-38	TCP family protein