PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu045238.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 239aa MW: 26173.4 Da PI: 7.992

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu045238.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00089	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Oeu045238.1 90 YQCKTCNRCFPSFQALGGHRASH 112 9***********99999998887 PP
2	zf-C2H2	13.7	0.00018	156	178	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H Oeu045238.1 156 HECSICGAEFTSGQALGGHMRKH 178 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MVAPQESMAI RDHNHMIKGK RTKRQRHISQ LSLTMATSSC SSAEVSGGGF GGAATEEEEE 60 EYMANCLILL AKGKTQKLCE PPAVTRSNVY QCKTCNRCFP SFQALGGHRA SHKKLQTTSL 120 EENVLQISND HGTNISFQIS RSRDLRSPEN TKSRVHECSI CGAEFTSGQA LGGHMRKHRP 180 LPSHDQDSLK AQKSRNPLSL DLNLPAAPEG DDDHIEYSKF SASKEQVLST SPLVDCHL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	2e-38	C2H2 family protein