PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu044629.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 373aa MW: 42609.7 Da PI: 9.9313

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu044629.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.2	8.4e-40	122	252	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa.ks 97 +gkk r ski+T++g RdRR+Rls+++a++fFdLqd LG+ ++sktieWL++++k ai el ++ ++++++ +++s s+++ +++++ +s++ k+ Oeu044629.1 122 TGKKYRRSKICTAQGVRDRRIRLSLQVARKFFDLQDLLGYARASKTIEWLFTKSKNAITELSKN--KPKEKTiIEDNSISAHK--GAARKYASTErKK 215 79************************************************************..44434432222233322..2333333333255 PP TCP 98 kksqksaasalnlakesrakarararertrekmrikn 134 ++++ +++ +++esr kararar+rtr+km ik Oeu044629.1 216 NDEKPQKSGCKPYSRESRDKARARARDRTRNKMIIKG 252 555555555699999****************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MYPSSNIENP LESLFKRSFP FDQKPSPKQD DPSLFFHFPS PLLDENEFPL NQILFQNHPM 60 TVHNCIAHDY QIETYLDRTK KETTEGSNID PSKLNEKSTE SIPNEAITPS KKNLGPLLLK 120 RTGKKYRRSK ICTAQGVRDR RIRLSLQVAR KFFDLQDLLG YARASKTIEW LFTKSKNAIT 180 ELSKNKPKEK TIIEDNSISA HKGAARKYAS TERKKNDEKP QKSGCKPYSR ESRDKARARA 240 RDRTRNKMII KGLENSNKWS FDLNPNDFQQ LRSFSSSLEA VEESSSHNQK HDAYANSLEN 300 RLSDVGIIEK FLGNSSTNSW AIPDYSNNNF IGFLGNWDVN NDRINSEMTN MVSFGGNPSS 360 VYFPTSGFPF QQ*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MYPSSNIENP LESLFKRSFP FDQKPSPKQD DPSLFFHFPS PLLDENEFPL NQILFQNHPM  60
TVHNCIAHDY QIETYLDRTK KETTEGSNID PSKLNEKSTE SIPNEAITPS KKNLGPLLLK  120
RTGKKYRRSK ICTAQGVRDR RIRLSLQVAR KFFDLQDLLG YARASKTIEW LFTKSKNAIT  180
ELSKNKPKEK TIIEDNSISA HKGAARKYAS TERKKNDEKP QKSGCKPYSR ESRDKARARA  240
RDRTRNKMII KGLENSNKWS FDLNPNDFQQ LRSFSSSLEA VEESSSHNQK HDAYANSLEN  300
RLSDVGIIEK FLGNSSTNSW AIPDYSNNNF IGFLGNWDVN NDRINSEMTN MVSFGGNPSS  360
VYFPTSGFPF QQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-24	TCP family protein