PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu044628.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 393aa MW: 45111.5 Da PI: 9.8234

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu044628.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	133.6	1.8e-41	122	272	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssa...sec...eaesssssa 82 +gkk rhski+T++g RdRR+Rls+++a++fFdLqd LG+ k+sktieWL++++k ai el ++ + +s+ ec + +++s + Oeu044628.1 122 TGKKYRHSKICTAQGVRDRRIRLSLQVARKFFDLQDLLGYAKASKTIEWLFTKSKSAITELSKNkpkvktssildDLNSEsfvFECdivSVIEENSIS 219 79************************************************************8877666555522222233444443333333333 PP TCP 83 snsssgkaaksaa.kskksqksaasalnlakesrakarararertrekmrikn 134 ++++++++ +s++ k+++++ + + +++esr kararar+rtr+km ik Oeu044628.1 220 AHKGAARKYASTErKKNDEKPQISVYKPYSRESRDKARARARDRTRNKMIIKG 272 3444445555555366666666666788888****************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MYPSSNIENP FESLFKRSLP FNQKPSPKQD DPSLFFHFPS PLLDENEFPL NQILFQNHPM 60 TVHNCIAHDY QIETYLDRTK KETTEGSNSD PSKLNEKSTK SIPDEAITPS KKNLRPLLLK 120 RTGKKYRHSK ICTAQGVRDR RIRLSLQVAR KFFDLQDLLG YAKASKTIEW LFTKSKSAIT 180 ELSKNKPKVK TSSILDDLNS ESFVFECDIV SVIEENSISA HKGAARKYAS TERKKNDEKP 240 QISVYKPYSR ESRDKARARA RDRTRNKMII KGLENSNKWS FDLNPNDFQQ LRPFSSSSEA 300 VEESRSHNQK HDAYANSLEN RLSDVGIIEK FLGHSSTNSW AIHDYSNNNF RGFHGNWDMN 360 NDRINSEMTN MVSFGGNPSS VYFPTSSFPF QQ*

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MYPSSNIENP FESLFKRSLP FNQKPSPKQD DPSLFFHFPS PLLDENEFPL NQILFQNHPM  60
TVHNCIAHDY QIETYLDRTK KETTEGSNSD PSKLNEKSTK SIPDEAITPS KKNLRPLLLK  120
RTGKKYRHSK ICTAQGVRDR RIRLSLQVAR KFFDLQDLLG YAKASKTIEW LFTKSKSAIT  180
ELSKNKPKVK TSSILDDLNS ESFVFECDIV SVIEENSISA HKGAARKYAS TERKKNDEKP  240
QISVYKPYSR ESRDKARARA RDRTRNKMII KGLENSNKWS FDLNPNDFQQ LRPFSSSSEA  300
VEESRSHNQK HDAYANSLEN RLSDVGIIEK FLGHSSTNSW AIHDYSNNNF RGFHGNWDMN  360
NDRINSEMTN MVSFGGNPSS VYFPTSSFPF QQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	6e-26	TCP family protein