PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu043888.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 851aa    MW: 93892.4 Da    PI: 6.4201
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu043888.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.79.3e-191977357
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Oeu043888.1 19 KYVRYTPEQVEALERVYHECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 77
                 5679*****************************************************97 PP
2START184.84.7e-581633712205
                  HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEX CS
        START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvae 97 
                  +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+ ++g a+ra+g+v  +++  v+e+l+d++ W +++++ ++l+v+s+g  g+++l +++
  Oeu043888.1 163 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIITISHCCTGIASRACGLVSLEPT-RVAEILKDRLSWYRDCRAFDVLNVLSTGngGTIELLYMQ 259
                  789*******************************************************.9999999999***************************** PP

                  XTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHH CS
        START  98 lqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglae 191
                  l+a+++l+p Rdf+ +Ry+  +++g++vi+++S++++q+ p+    + +vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l++s++  
  Oeu043888.1 260 LYAPTTLAPaRDFWLLRYTSVMEDGSLVICERSLNNTQNGPSippAQDFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLL 357
                  *****************************************99999**************************************************** PP

                  HHHHHHHHTXXXXX CS
        START 192 gaktwvatlqrqce 205
                  +++t++a+l+++++
  Oeu043888.1 358 AQRTTLAALRQLRQ 371
                  **********9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 851 aa     Download sequence    
MAVTSACKDG GKMVMDNGKY VRYTPEQVEA LERVYHECPK PSSLRRQQLI RECPILSNIE  60
PKQIKVWFQN RRCREKQRKE SSRLQAVNRK LTAMNKLLME ENDRLQKQVS HLVYENSYFR  120
QHTQNATLAT RDNSCESVVT SGQQHLTSHH PPRDASPAGL LSIAEETLTE FLSKATGTAV  180
EWVQMPGMKP GPDSIGIITI SHCCTGIASR ACGLVSLEPT RVAEILKDRL SWYRDCRAFD  240
VLNVLSTGNG GTIELLYMQL YAPTTLAPAR DFWLLRYTSV MEDGSLVICE RSLNNTQNGP  300
SIPPAQDFVR AEMLPSGYLI RPCEGGGSII HIVDHMDLEP WSVPEVLRPL YESSTLLAQR  360
TTLAALRQLR QISLEVSQPN VTGWGRRPAA LRALAQRLSR GFNEAVNGFT DESWSMIESD  420
GIDDVAVLVN SSPGKLMGPN LTYANGLPSM STSVLCAKAS MLLQNVPPAI LLRFLREHRS  480
EWADNGIDAY LSAAFTAGPC SLPVARAGYF GGQAILPLAH TIEHEEASNL FMEVVRLENV  540
SHFREDTIMP SDIFFVQVCS GVDENAVGSC AELIFAPIDA SLSDDAPLLP SGFRIIPLDS  600
KANTSSPNRT LDLASTLEVG QAGNRASGDY SRHLGSAKSV MTIAFQFAFE IHLQENIAAM  660
ARQYIRSIIS SVQRVALALS PSNLGPQASL RPPPGTPEAQ TLTRWICQSY RFFLGVELLK  720
PGSEGSESIV KALWHHSDAV LCCSLKFLRF TQALPVFTFA NQVGLDMLET TLVALQDITL  780
EKIFNDNGRK ALFAELPQIM QQGFACLQGG IAMSSMGRLI SYERAVAWKV LDEDENAHCL  840
CFVFINWSFV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein