PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu043856.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family TCP
Protein Properties Length: 266aa    MW: 29881.6 Da    PI: 10.8745
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu043856.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP149.22.7e-46581992133
          TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas.nsssg......... 88 
                  ++k drhski T+ g+RdRRvRls+++a++fFdLqd+LGfdk+skt++WLl+++k+ai el +t+ s+ +   ++ +s+++++ +++ +         
  Oeu043856.1  58 TVKNDRHSKIFTATGPRDRRVRLSISIARKFFDLQDMLGFDKPSKTLDWLLTNSKTAIRELIRTKKSTDNIHsSPFESENNKAgEKG-Kslgsnlkkk 154
                  789*************************************************************55555333333333333331222.2366777765 PP

          TCP  89 kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                  +  +++++++ ++ ++ s+l +a++srakarararertrekm+ k
  Oeu043856.1 155 SFINATNTKEAKNPQQVSTLLIARDSRAKARARARERTREKMCSK 199
                  333444444444444555799999*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MFSSSKNSHF LPQIESSIDT STSFYCLNSS ETLLHHHDDL LNMDLGTSAN AFPRRKRTVK  60
NDRHSKIFTA TGPRDRRVRL SISIARKFFD LQDMLGFDKP SKTLDWLLTN SKTAIRELIR  120
TKKSTDNIHS SPFESENNKA GEKGKSLGSN LKKKSFINAT NTKEAKNPQQ VSTLLIARDS  180
RAKARARARE RTREKMCSKR LNIQARQVSD FSNSIPSQSK PSSSILGFQQ NHIVSSDLTP  240
NCNASSPNYA AENWDIGYIV RRSSL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.24e-28TCP family protein