PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043474.3

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CPP

Protein Properties

Length: 760aa MW: 82842.6 Da PI: 6.5871

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043474.3	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	26.4	1.3e-08	479	502	17	40
TCR 17 YCeCfaagkkCseeCkCedCkNke 40 YCeCfaag++C e C+C dC+Nk Oeu043474.3 479 YCECFAAGVYCVEPCSCMDCFNKP 502 **********************96 PP
2	TCR	51.8	1.7e-16	549	587	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnC+ks ClkkYCeC+++g+ Cs +C+C++CkN Oeu043474.3 549 RHKRGCNCRKSGCLKKYCECYQSGVGCSINCRCDGCKNV 587 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MQDSPVFDFL NSLSPIEPVK PMHITQTINP LSFASIPSVF TSPHVSSLKR SRFLRRHQLA 60 DPSKPEFSTD GGKTIDANEL ILDASSKSDK PHGNLNPEDS VDEAVSQSSY EYSKLDVELS 120 QSVVYDSRCP HSSLTSSYYL SAKHSTEYGC TSSTFAPFIQ EASQKAFYAT EENEEGVDQI 180 EQDKEATGCD WESFISNASD ILIFESPINT ESCKKSAESG ESFYANVSNN VQNKLSFSAA 240 GSSEQVGEGS GSGIEKLSNQ LGEGSELKEI AKTHDIVTGS STSNQSENMD NEPDSGLHRG 300 VRRRCLVFEM AGNLKKHLDE NSASDSYLSD SSKCVLAGIG LHLNALATTP KGYKFVAKFR 360 SPAPQEELIN NSSAVNLLER ETSTVENGFP PVEDDSQASG CIVNEEITHS SPKKKRHVPL 420 SKLEQVSEGE ACKRCNCKKS KCLKLDLALW VSLRMTTGLL KVRPGINARL RLGKLLLCYC 480 ECFAAGVYCV EPCSCMDCFN KPVHEDTVLA TRKQIESRNP LAFAPKVIRS SDSLCETQSD 540 SRKTPASARH KRGCNCRKSG CLKKYCECYQ SGVGCSINCR CDGCKNVFGR KDGYNVIGKE 600 VELEEDGGDI TEKSMVDRNS KKTAIQNNLE QNPDSALPAT LDSALPATPL QCPGSSVQHP 660 FTSKNKPPIS FPSTRSSFGK TGTFVSQPKF DKHFEPVPEH EMPKFGQEGS PNSGIKSSSP 720 NSKRVSSYHS GAETSPELRS SRKLILQSIP SFPSLTPKD*

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MQDSPVFDFL NSLSPIEPVK PMHITQTINP LSFASIPSVF TSPHVSSLKR SRFLRRHQLA  60
DPSKPEFSTD GGKTIDANEL ILDASSKSDK PHGNLNPEDS VDEAVSQSSY EYSKLDVELS  120
QSVVYDSRCP HSSLTSSYYL SAKHSTEYGC TSSTFAPFIQ EASQKAFYAT EENEEGVDQI  180
EQDKEATGCD WESFISNASD ILIFESPINT ESCKKSAESG ESFYANVSNN VQNKLSFSAA  240
GSSEQVGEGS GSGIEKLSNQ LGEGSELKEI AKTHDIVTGS STSNQSENMD NEPDSGLHRG  300
VRRRCLVFEM AGNLKKHLDE NSASDSYLSD SSKCVLAGIG LHLNALATTP KGYKFVAKFR  360
SPAPQEELIN NSSAVNLLER ETSTVENGFP PVEDDSQASG CIVNEEITHS SPKKKRHVPL  420
SKLEQVSEGE ACKRCNCKKS KCLKLDLALW VSLRMTTGLL KVRPGINARL RLGKLLLCYC  480
ECFAAGVYCV EPCSCMDCFN KPVHEDTVLA TRKQIESRNP LAFAPKVIRS SDSLCETQSD  540
SRKTPASARH KRGCNCRKSG CLKKYCECYQ SGVGCSINCR CDGCKNVFGR KDGYNVIGKE  600
VELEEDGGDI TEKSMVDRNS KKTAIQNNLE QNPDSALPAT LDSALPATPL QCPGSSVQHP  660
FTSKNKPPIS FPSTRSSFGK TGTFVSQPKF DKHFEPVPEH EMPKFGQEGS PNSGIKSSSP  720
NSKRVSSYHS GAETSPELRS SRKLILQSIP SFPSLTPKD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	413	441	KKKRHVPLSKLEQVSEGEACKRCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-122	CPP family protein