PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu043398.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 289aa    MW: 33352.3 Da    PI: 6.1745
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu043398.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.4e-16133177347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W++I+r+  +++t+ q+ s+ qky
      Oeu043398.1 133 PWTEEEHQLFLMGLKKYGKGDWRSISRHYVLNKTPTQVASHAQKY 177
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MEWPDFQYAP FNDNLSWDDL FHPQFEVEKP AEWTAEENIL FENALAEVDP SNPAFFENVA  60
YRVPWRSIDE IKSHYQALVE DIELIQSGIY QIPKSEIDDQ DNKDELQERN EKESPSPAPK  120
KTCNSQKRRR GVPWTEEEHQ LFLMGLKKYG KGDWRSISRH YVLNKTPTQV ASHAQKYFRR  180
QNSLTPKDKR RPSIHDIQCV NPTTLVSMPP INTNYINNKT VMEDAKLPSG NNFELNFNGK  240
FGHFTNVRNP MCPPVGTSSL ATDQMFNQAS TSYSPSCMFP SMQKKPWG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127151KRRRGVPWTEEEHQLFLMGLKKYGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-49MYB family protein