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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu043397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB_related | ||||||||
Protein Properties | Length: 289aa MW: 33368.4 Da PI: 6.1734 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.5 | 2.4e-16 | 133 | 177 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G+g+W++I+r+ +++t+ q+ s+ qky Oeu043397.1 133 PWTEEEHQLFLMGLKKYGKGDWRSISRHYVLNKTPTQVASHAQKY 177 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MEWPDFQYAP FNDNLSWDDL FHPQFEVEKP AEWTAEENIL FENALAEVDP SNPAFFENVA 60 YRVPWRSIDE IKSHYQALVE DIELIQSGIY QIPKSEIDDQ DNKDELQERN EKECPSPAPK 120 KTCNSQKRRR GVPWTEEEHQ LFLMGLKKYG KGDWRSISRH YVLNKTPTQV ASHAQKYFRR 180 QNSLTPKDKR RPSIHDIQCV NPTTLVSMPP INTNYINNKT VMEDAKLPSG NNFELNFNGK 240 FGHFTNVRNP MCPPVGTSSL ATDQMFNQAS TSYSPSCMFP SMQKKPWG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 127 | 151 | KRRRGVPWTEEEHQLFLMGLKKYGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 2e-49 | MYB family protein |