PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu042840.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 466aa MW: 50642.2 Da PI: 8.5359

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu042840.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.2	6.9e-24	168	212	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCsr+v +++k+CErH h+++ rsrk++e+ Oeu042840.1 168 DPEPWRCRRTDGKKWRCSRDVAPDQKYCERHAHKSKARSRKPVET 212 79****************************************997 PP
2	QLQ	50.5	6.1e-18	112	147	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT++Q+q+L++Q ++yKy++a+ PvPp+Ll+++++ Oeu042840.1 112 LFTDKQWQELERQNMIYKYIMASIPVPPQLLLQLSN 147 6*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MGDGNKIGID SSLECDFGLG LKMQVQPTES SICKRAMVFP HYYQLSSSQN NSFSGVGSGG 60 GGGANFCNPN KQAVGWVSNI YDSLGGGGGA VFPRSSHYNA PKGGVLISGK ALFTDKQWQE 120 LERQNMIYKY IMASIPVPPQ LLLQLSNAPD SFQSKTSGLD LRFSRGSDPE PWRCRRTDGK 180 KWRCSRDVAP DQKYCERHAH KSKARSRKPV ETQSHNSTTT TNNSQQSLLL PPNTPTNQKQ 240 MDFTAPYDQT RCTEWFMGGG SSSGTITLPV STCNRQWHQR MQSSSKLGHF HRDNKNNLSV 300 FQQDFMNSFL DHPKLAYLQG NPDLNTEKTQ TTRHFIDEWS TGEKEGNEGS AAFLNKKRFS 360 PSSLSLSMSR GIGIGEDNDR NAAMGIGTMN TVKENDGFLN TVSWLSSPPG GPLGEVLGLG 420 NGAGGKGCLD LTSPHGYSNS TTNSSCCSKS SCEDGIGTHS HNFIG*

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MGDGNKIGID SSLECDFGLG LKMQVQPTES SICKRAMVFP HYYQLSSSQN NSFSGVGSGG  60
GGGANFCNPN KQAVGWVSNI YDSLGGGGGA VFPRSSHYNA PKGGVLISGK ALFTDKQWQE  120
LERQNMIYKY IMASIPVPPQ LLLQLSNAPD SFQSKTSGLD LRFSRGSDPE PWRCRRTDGK  180
KWRCSRDVAP DQKYCERHAH KSKARSRKPV ETQSHNSTTT TNNSQQSLLL PPNTPTNQKQ  240
MDFTAPYDQT RCTEWFMGGG SSSGTITLPV STCNRQWHQR MQSSSKLGHF HRDNKNNLSV  300
FQQDFMNSFL DHPKLAYLQG NPDLNTEKTQ TTRHFIDEWS TGEKEGNEGS AAFLNKKRFS  360
PSSLSLSMSR GIGIGEDNDR NAAMGIGTMN TVKENDGFLN TVSWLSSPPG GPLGEVLGLG  420
NGAGGKGCLD LTSPHGYSNS TTNSSCCSKS SCEDGIGTHS HNFIG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	3e-31	GRF family protein