PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu042737.3

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HB-other

Protein Properties

Length: 458aa MW: 51873.6 Da PI: 8.348

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu042737.3	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	45.3	1.5e-14	32	84	4	52
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrR 52 t+t+eq+e Le+ + ++++p++++r ++ ++ g++ rq+k+WFqN R Oeu042737.3 32 HVTYTDEQIELLEKIYVECPNPTRSQRSQIVQEHpilnGIENRQIKIWFQNCR 84 579****************************999*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MEIIEHIVAE SSNRGTGMGT GRPPRLEEVE KHVTYTDEQI ELLEKIYVEC PNPTRSQRSQ 60 IVQEHPILNG IENRQIKIWF QNCRHVPQRM HAFIALRCCE RNKKEKEEFL LMTRNLRAIN 120 TMLVEENNLL QNEVAQKMQL RENLRNLLIA TASVADLGHE TDAFPAANSR SIPLPAEETT 180 NRFLSKATGT VTNWIADLKL KVFMVVMLFG LYLLVSNHLF NFRLSGAVHV LQTRVGEAAR 240 PTAAPFDPIK AQSDFILPSF LKLEILKDCP SWFPNCRNLE VLDKFLVNNG TTTELMYTQR 300 DGQDTWLTGA DSSKFRCLTF FMAYQFSFSI HLWEDVTSMA QPYVYHVLSQ KNNSLKATSG 360 SYLVKNSTEA NPAMGSMFSR HSVDAANLAY WIGQSYRQIK FGCGVSQRQL PEQRLFVGLK 420 LIQGLSSVFS AGNCVMDRSL CRELTRGMVT SPSSKLC*

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MEIIEHIVAE SSNRGTGMGT GRPPRLEEVE KHVTYTDEQI ELLEKIYVEC PNPTRSQRSQ  60
IVQEHPILNG IENRQIKIWF QNCRHVPQRM HAFIALRCCE RNKKEKEEFL LMTRNLRAIN  120
TMLVEENNLL QNEVAQKMQL RENLRNLLIA TASVADLGHE TDAFPAANSR SIPLPAEETT  180
NRFLSKATGT VTNWIADLKL KVFMVVMLFG LYLLVSNHLF NFRLSGAVHV LQTRVGEAAR  240
PTAAPFDPIK AQSDFILPSF LKLEILKDCP SWFPNCRNLE VLDKFLVNNG TTTELMYTQR  300
DGQDTWLTGA DSSKFRCLTF FMAYQFSFSI HLWEDVTSMA QPYVYHVLSQ KNNSLKATSG  360
SYLVKNSTEA NPAMGSMFSR HSVDAANLAY WIGQSYRQIK FGCGVSQRQL PEQRLFVGLK  420
LIQGLSSVFS AGNCVMDRSL CRELTRGMVT SPSSKLC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60690.1	3e-33	HD-ZIP family protein