PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042272.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 313aa    MW: 35072.6 Da    PI: 7.9376
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042272.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43e-09159206455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Oeu042272.1 159 SHSLAERARREKISKKMKYLQDLVPGC----DKVTGKAGMLHEIINYVQSLQ 206
                  8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MLRCVAQSTT SSPEKYAVMG MDMSVLERQR AVLQRLCQQQ QHSWQLQEAA NINPMIHQNI  60
ASVSAVSNNS SMTKHDHHID SRMLKRKGTV SNSTRKRKAE FDVEEDCNDK GAERDAGEIQ  120
SDITVKTDRE TSTNNSSKES IQKPDYIHVR ARRGQATDSH SLAERARREK ISKKMKYLQD  180
LVPGCDKVTG KAGMLHEIIN YVQSLQRQVE FLSMKLAALN PRLDFSIDDF FSKEIPAYIA  240
SFPMQLQVAN PTSLQYNPLQ QGGISCGVDI AMAPSQILPQ KEGSSSVPIT EQAQMLPTWD  300
SEWQNLFSAG FH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.11e-56bHLH family protein