PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042268.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ZF-HD
Protein Properties Length: 346aa    MW: 38096.3 Da    PI: 8.4184
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042268.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.51.4e-32139195259
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  ++v Y+eClkNhAas+Ggh++DGCgEfmps geegta+al+CaAC+CHR+FHRre + 
  Oeu042268.1 139 HSVIYRECLKNHAASVGGHVLDGCGEFMPS-GEEGTAEALRCAACDCHRSFHRREADG 195
                  5789*************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MERSVQERSI GMPNSVSYNP PQLNQESLVK LPLAPIISTP SDRRGNATVS TRRGIAIFSP  60
RQTLDQHQLN SPPPPPQPSL VQKDSTPDPD LATPAGAATD GTSNSKTDPP PQPQPQSQPQ  120
PQPQPQPHDP PATSTATTHS VIYRECLKNH AASVGGHVLD GCGEFMPSGE EGTAEALRCA  180
ACDCHRSFHR READGEPETG TSPCYTYIFN SRNNNSHPNL AIHGQQQHHF TATPPSGPAL  240
PTTIGRNSVG AGAESSSEDI DIFQCNARRH EDVQPSFSGS KKRFRTKFSQ SQKDRMHEFA  300
TRMGWKIQKK DEQELQQFCN EMGVKRQVFK VWMHNNRQAM KKRQT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.16e-60ZF-HD family protein