PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu042217.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 385aa MW: 42228.9 Da PI: 8.3207

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu042217.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.3	3.1e-24	88	132	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ Oeu042217.2 88 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKPVET 132 79****************************************986 PP
2	QLQ	65.7	1.1e-22	27	61	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+++yKyL+a++PvPp+L+ +i+ Oeu042217.2 27 PFTAMQWQELEHQAMIYKYLVAGLPVPPDLVIPIR 61 9********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MSGTGSSVAV GIGGAGGELG YGRCRPPFTA MQWQELEHQA MIYKYLVAGL PVPPDLVIPI 60 RHSFEALSAR FFHHPSFGYC SYYGKKFDPE PGRCRRTDGK KWRCSKDAHP DSKYCERHMH 120 RGRNRSRKPV ETHSTSQSLS TATSHITSGS SGNSGSYQTG GNVSFQNMPL YSVSSEGSSF 180 GNNVTKLHME PVPYGINNKE YRYELSYCNL VAVTQTQAIW WYIHGLAPDA DENTYSPEGC 240 GSVGGLKLGT SVGSSTWYLT PSQLPPNLSL KQKSDSQFLG HSSPQLHMPQ AFVPIDTMLS 300 KHQQQHCFLG SDSGSPGPAK QEQHSVHPFF SEWPTTKESW SNLDENETNK NAFSTTQLSI 360 SIPRSSSEFS SGSGCSPNGK FKIF*

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MSGTGSSVAV GIGGAGGELG YGRCRPPFTA MQWQELEHQA MIYKYLVAGL PVPPDLVIPI  60
RHSFEALSAR FFHHPSFGYC SYYGKKFDPE PGRCRRTDGK KWRCSKDAHP DSKYCERHMH  120
RGRNRSRKPV ETHSTSQSLS TATSHITSGS SGNSGSYQTG GNVSFQNMPL YSVSSEGSSF  180
GNNVTKLHME PVPYGINNKE YRYELSYCNL VAVTQTQAIW WYIHGLAPDA DENTYSPEGC  240
GSVGGLKLGT SVGSSTWYLT PSQLPPNLSL KQKSDSQFLG HSSPQLHMPQ AFVPIDTMLS  300
KHQQQHCFLG SDSGSPGPAK QEQHSVHPFF SEWPTTKESW SNLDENETNK NAFSTTQLSI  360
SIPRSSSEFS SGSGCSPNGK FKIF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-47	GRF family protein