PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu042037.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 280aa MW: 31515.8 Da PI: 7.5464

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu042037.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.7e-05	105	124	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C k+F+r n++ H+ Oeu042037.1 105 FSCSVCQKTFNRYNNMQMHM 124 89*****************9 PP
2	zf-C2H2	11.7	0.00083	190	212	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+k+F + + ++H +++ Oeu042037.1 190 FGCRKCKKPFAVRGDWRTHEKNC 212 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MRSHSSSPYI ISSSESFCDE EDDDSTLLSL GPPGQKYHNI YHDYNQTQSF QNRNEIGVTV 60 ALHIGPPNSN SGTTSSGNPT EMGRHAEGQY WIPTPAQILV GPTQFSCSVC QKTFNRYNNM 120 QMHMWGHGSE YRKGPESLRG TKAASSILRL PCYCCAEGCK NNIEHPSSKP LKDFRTLQTH 180 YKRKHGSKPF GCRKCKKPFA VRGDWRTHEK NCGKLWFCIC GSDFKHKRSL KDHVRSFGDG 240 HAPHSDNLYS YVHEGEEEED EEGNDEEYRN GGYVPAGLN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-114	C2H2 family protein