PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu041879.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NAC

Protein Properties

Length: 475aa MW: 53629.6 Da PI: 4.7892

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu041879.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105	9.8e-33	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikev..diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWkat 86 lp+G++F+P+d+e++ + L+k g++ ++++ i + +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W++t Oeu041879.2 58 LPRGVKFDPSDQEIIFHLLAKVGVGNSkphpfINEFIPIVDEddGICYTHPQNLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRKVHgdnfgDVRWHKT 154 799**********776666644444677664444444444245******.677888899**************85555555888 PP NAM 87 gkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 g++k+vl +g ++g+kk++v+y r k+ekt+Wvmh+y+l Oeu041879.2 155 GRTKPVLL-DGVQKGCKKIMVLYASpiRGGKPEKTNWVMHQYHL 197 ****.99********5434677777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MASTSWLVDS NRIATKIRSA SGACDPENVN WKSNPTKACP NCQYVIDNSD VVKEWPGLPR 60 GVKFDPSDQE IIFHLLAKVG VGNSKPHPFI NEFIPIVDED DGICYTHPQN LPGVKQDGSV 120 SHFFHRAIKA YNTGTRKRRK VHGDNFGDVR WHKTGRTKPV LLDGVQKGCK KIMVLYASPI 180 RGGKPEKTNW VMHQYHLGIA EDESNREYVI SKVFYQQQQQ HIKESEKNEE VGEGVDAMMA 240 KVDPITPMSV TPEPHISEVF YQQQPVKESE KNEEVPQGVD TMIANVDPVA PMPVSPKTHH 300 IERRFYYCET AFKSVGPSDQ HHDLGYMEGE VEVPFEQSND EDYNNSENHT GEVEDKNDDE 360 AADGSKCWES ESQYLLDSQQ LVEGLSLCDE FLQSQSPNRD VQEKNQELNC KPRLSDYARL 420 GPEDFKKDLA ECQDLVLDPA NIELDTPPDF RLSQLEFGSQ ESYIAWRGSI TGSR*

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MASTSWLVDS NRIATKIRSA SGACDPENVN WKSNPTKACP NCQYVIDNSD VVKEWPGLPR  60
GVKFDPSDQE IIFHLLAKVG VGNSKPHPFI NEFIPIVDED DGICYTHPQN LPGVKQDGSV  120
SHFFHRAIKA YNTGTRKRRK VHGDNFGDVR WHKTGRTKPV LLDGVQKGCK KIMVLYASPI  180
RGGKPEKTNW VMHQYHLGIA EDESNREYVI SKVFYQQQQQ HIKESEKNEE VGEGVDAMMA  240
KVDPITPMSV TPEPHISEVF YQQQPVKESE KNEEVPQGVD TMIANVDPVA PMPVSPKTHH  300
IERRFYYCET AFKSVGPSDQ HHDLGYMEGE VEVPFEQSND EDYNNSENHT GEVEDKNDDE  360
AADGSKCWES ESQYLLDSQQ LVEGLSLCDE FLQSQSPNRD VQEKNQELNC KPRLSDYARL  420
GPEDFKKDLA ECQDLVLDPA NIELDTPPDF RLSQLEFGSQ ESYIAWRGSI TGSR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-170	NAC family protein