PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu041131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | FAR1 | ||||||||
Protein Properties | Length: 138aa MW: 15926.1 Da PI: 9.6032 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 52.8 | 1.3e-16 | 35 | 123 | 2 | 83 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 fYn+YA+e+ Fs r +skk+ ++e+ +++fvC+keg+++++ +k +++ +r+ r+gCkakl++ + k + +w v+++++ Oeu041131.1 35 FYNSYAREARFSARLINSKKRPGTNEVFSKQFVCYKEGETDNTYQKkfkhlvKRSGERQGGIIRVGCKAKLTIIRPKsSVNWIVSNFVE 123 *********************9******************999888899998888999999***********988887999****9974 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MEDDTSIQTF TPQVAEERKP KIGQEFETIE EAYAFYNSYA REARFSARLI NSKKRPGTNE 60 VFSKQFVCYK EGETDNTYQK KFKHLVKRSG ERQGGIIRVG CKAKLTIIRP KSSVNWIVSN 120 FVELIIMHSQ ALQEFTY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-14 | FAR1 family protein |