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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu040531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 178aa MW: 18906.1 Da PI: 4.9692 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.4e-19 | 17 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 + ykGVr++k++g+Wv+eIr+p r r++lg+f t+e+Aa a++ a+++l+g Oeu040531.1 17 PVYKGVRRRKSSGKWVSEIREP-----RtpNRIWLGTFPTPEMAAVAYDVAALALKG 68 68*******************9.....4478***********************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MSQSSSSTAN RNSGRHPVYK GVRRRKSSGK WVSEIREPRT PNRIWLGTFP TPEMAAVAYD 60 VAALALKGSE AELNFPNSAS SLPVPASASP RDIQAAAASA AAAAGAAVDA LASRNNTVDR 120 TAYPGLSEIP EFIDEDLIFD MPNVLVNMAQ GMLLSPPRLG DTAAPENIED ENLWNHF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 20 | 26 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 3e-40 | ERF family protein |