PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu040449.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

DBB

Protein Properties

Length: 282aa MW: 30980.3 Da PI: 4.0953

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu040449.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21	6.7e-07	5	44	6	39
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ + e++ + +C+++ lC +C + H+ H++ Oeu040449.1 5 CDFCAEQRSTVYCRSDAASLCLSCDRNVHSAnalsrrHSR 44 *****************************65677777765 PP
2	zf-B_box	26.9	9.9e-09	46	90	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +C++++ +++ C + +++lC++C ++H+g H+++p+ Oeu040449.1 46 LVCERCNTQPAYVRCIEERVFLCQNCDWTGHSGsdtspaHKRQPV 90 68*****************************98999999999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MGYLCDFCAE QRSTVYCRSD AASLCLSCDR NVHSANALSR RHSRTLVCER CNTQPAYVRC 60 IEERVFLCQN CDWTGHSGSD TSPAHKRQPV NCYSGCPSAT ELSAIWSFLL DSPSVGDTTC 120 KQGMGSFSIT DNQLIDYQVS QEKNDILDAS VVIEASGLNN MDVNESTVWM GSQVPLFDPK 180 LHNTEQPAGS SNPALPMVFP GTKGATFYEG DSFYDNFNMD EVDLDIENYE ELFSAALDNT 240 EQLFDDDGID GLFGTKDMSV SNCRSANAAE VILKWDTISC M*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	8e-72	CO-like family protein