PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039945.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 294aa    MW: 32802.9 Da    PI: 8.8155
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039945.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.4e-09532128
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIa 28
                     + +WT eE+e l+ +v ++G+g Wk I 
      Oeu039945.2  5 KVKWTSEEEEALKAGVVKHGTGKWKNIL 32
                     579**********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MGNQKVKWTS EEEEALKAGV VKHGTGKWKN ILIDPQFAPY LINRSNIDLK MYLCFILLLL  60
VVFTCLRFGS FTQDKWRNMS ISYGQCSREK SKASRVKTIS SEALSTPTTE NLVAEADAVD  120
DFSRSPRDAR NAPGYTTMIF EALLSVKDSN GSNIGAIVEF IEQKHEVPQN FRRLLSSKLR  180
RLVLQGKLEK VHNCYKIKDA ALGMKTPMPK QKDIRPRPVQ NSGLVISAET VENAAMIAAY  240
KIAEADNKSF VAAEAVKEAE RVSIMAEDAD SVMLLAKEIF EKCEYCCYLK SGL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.15e-51MYB_related family protein