PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu039272.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23925.6 Da PI: 5.9522 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.6 | 7.5e-14 | 70 | 116 | 4 | 54 |
AP2 4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 GVr +k +g++ AeIrd ++ +kr++lg++ t eeA + + a ++++e Oeu039272.1 70 IGVRKRK-SGKYSAEIRDpFK----KKRVWLGTYNTVEEASEVYLAKKREFE 116 6***999.7*********662....5********************999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MKRKVRVSYS DPDATDSSSN EGGDGPEKSK RLVHEILGKN LDEKGSGKIR PRIKKFNSRV 60 LDQNGMGKLI GVRKRKSGKY SAEIRDPFKK KRVWLGTYNT VEEASEVYLA KKREFEEKQS 120 AGWGIDCGPC DNSSEDSSPS VNEFDTLDSP KEVSSTEREV FEENKAASNE GQNFSLPDPS 180 GKFGMLFGVQ IIDNHGFLLG EFSKLDDFSI RESE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 92 | RKRKSGKYSAEIRDPFKKKR |
2 | 74 | 93 | RKRKSGKYSAEIRDPFKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 4e-20 | ERF family protein |