PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039176.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family BBR-BPC
Protein Properties Length: 309aa    MW: 34298 Da    PI: 10.0833
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039176.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind314.43.8e-9613081301
    GAGA_bind   1 mdddgsre..rnkg.yye..........paaslk.enlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllal 84 
                  mdd g+re  r++  yy+          +a++l+  n++ ++  + +erda+i+er+ al+ekk a++erd a +qrd+a+aer++al erdn+++al
  Oeu039176.1   1 MDDGGNREnrRHRMdYYKvppwnliapfQAKELNaLNINPRITMLCNERDAAIEERDRALAEKKMALNERDAAIQQRDAAIAERDNALRERDNAIAAL 98 
                  999999988888888**********9985545541468889999999*************************************************** PP

    GAGA_bind  85 llvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekka.kkkkkksekskkkvkke 181
                  +++++sl+  l  g + l+ t +  ++ +   +  e s++ +  +e  ++ +++    ++ +k  ++k+ + +  k++k+ +k+k+ s++ +++v++ 
  Oeu039176.1  99 QFQDKSLNAILNGGARGLKRTVQSAHILR---EVAEVSPISTVPSEAANSCQVKP---SKANKGAPSKSTKCAPSKSTKSpRKAKRVSKDLNRHVTTY 190
                  *****999776666665555544443333...23344555566666666655544...3333334443334444444433045566556666666666 PP

    GAGA_bind 182 saderskaekksidl.vlng.vslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGy 277
                  +    skae++ +d+ v+n+ +++Des++PvPvCsCtG+ r CYkWGnGGWqS+CCt ++S yPLP+++++r+aRi+grKmS g+f++lL +LaaeG+
  Oeu039176.1 191 G----SKAEWDAQDFgVMNQlIHFDESSMPVPVCSCTGVARHCYKWGNGGWQSSCCTNSLSEYPLPQMPNKRHARIGGRKMSAGVFSRLLTRLAAEGH 284
                  6....89********77786589*************************************************************************** PP

    GAGA_bind 278 dlsnpvDLkdhWAkHGtnkfvtir 301
                  dls p+DLkd+WAkHGtn+++ti+
  Oeu039176.1 285 DLSVPLDLKDYWAKHGTNRYITIK 308
                  ***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDDGGNRENR RHRMDYYKVP PWNLIAPFQA KELNALNINP RITMLCNERD AAIEERDRAL  60
AEKKMALNER DAAIQQRDAA IAERDNALRE RDNAIAALQF QDKSLNAILN GGARGLKRTV  120
QSAHILREVA EVSPISTVPS EAANSCQVKP SKANKGAPSK STKCAPSKST KSPRKAKRVS  180
KDLNRHVTTY GSKAEWDAQD FGVMNQLIHF DESSMPVPVC SCTGVARHCY KWGNGGWQSS  240
CCTNSLSEYP LPQMPNKRHA RIGGRKMSAG VFSRLLTRLA AEGHDLSVPL DLKDYWAKHG  300
TNRYITIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.12e-99BBR-BPC family protein