PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu039152.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 406aa MW: 43094.8 Da PI: 8.0461

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu039152.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.5	2.3e-38	96	222	3	98
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLl a+p+i+++tgt++ +a+++ ++s +ss+ + s++ Oeu039152.1 96 VAKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLHHAEPSIIAATGTGTMPANFStLNVSLRSSGTTISAPpsksaplflgg 193 6899*************************************************************999999877777777774444455556677777 PP TCP 89 ...................kaaksaaksk 98 + +++ +k++ Oeu039152.1 194 atgmlgfhhqlssnigfgqDPEENYMKKR 222 77777776666666666442222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MEFMEPHSEN QGSGSGSDHH APNQEPSSLQ LVALHHQSQS EPNPGSGQAP AHGPFMGSIS 60 MQSRTLGLSS SSINTTTSSS ITTTTAPTTA AVNNKVAKKP SKDRHTKVDG RGRRIRMPAL 120 CAARVFQLTR ELGHKSDGET IEWLLHHAEP SIIAATGTGT MPANFSTLNV SLRSSGTTIS 180 APPSKSAPLF LGGATGMLGF HHQLSSNIGF GQDPEENYMK KRFREDSSGA TSPTASRMGR 240 SGVRDQEPGS EQKPQKPNST HPTNFLPAPA MWAVAPAATN AGNAFWMLPV TGGATTTTVG 300 PGQQEHQLWQ YKASPMQRIG GFELPSGGRF SPVQLGSMVL QQPPPPVQQL GLGVSDTSNM 360 GIMGSINAYN NSRIDLGMNL EQHHHHHQNQ PQSNDSGDEN PKDSQ*

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MEFMEPHSEN QGSGSGSDHH APNQEPSSLQ LVALHHQSQS EPNPGSGQAP AHGPFMGSIS  60
MQSRTLGLSS SSINTTTSSS ITTTTAPTTA AVNNKVAKKP SKDRHTKVDG RGRRIRMPAL  120
CAARVFQLTR ELGHKSDGET IEWLLHHAEP SIIAATGTGT MPANFSTLNV SLRSSGTTIS  180
APPSKSAPLF LGGATGMLGF HHQLSSNIGF GQDPEENYMK KRFREDSSGA TSPTASRMGR  240
SGVRDQEPGS EQKPQKPNST HPTNFLPAPA MWAVAPAATN AGNAFWMLPV TGGATTTTVG  300
PGQQEHQLWQ YKASPMQRIG GFELPSGGRF SPVQLGSMVL QQPPPPVQQL GLGVSDTSNM  360
GIMGSINAYN NSRIDLGMNL EQHHHHHQNQ PQSNDSGDEN PKDSQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	3e-53	TCP family protein