PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu038807.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GATA

Protein Properties

Length: 618aa MW: 67947.9 Da PI: 9.0964

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu038807.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	52.3	7.6e-17	145	178	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C t kTp+WR gp g+ktLCnaCG++y++ + Oeu038807.1 145 CLHCATDKTPQWRTGPMGPKTLCNACGMRYKSGR 178 99*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MMAELEAAFD ATTMAGTSTD SSTLSRSTPE PHFASSLVNF ACREDLQKMQ LIQGMKARPD 60 GPSEPHQYQF PPETTRNATM FRPQMSVPWK ARSKRSRGAP AYWASRLSAV SPTPSTMSSS 120 SNSDKIKVKS NNAVTTEGGN GSRKCLHCAT DKTPQWRTGP MGPKTLCNAC GMRYKSGRFV 180 PEYRPAASPP FVLTKHSNSH RKVLELRRQK ELQEVQLHQQ QFLHQNMMFD ASDVYLTTVE 240 NAGQCLDQSS ISSPPPVLVT PLSIRSLSPS RRAKQSARPS SSLPAKPTTA KSAPSRKRPV 300 SASPILDDDD DAPLIVRRKK SSAFPSKALA STAPAPSSSA EAASSRPVDK GATLKETSSV 360 PESLSQPMDE PPSSQGVNPP NIEAEDLAED MPSSTIIDED ADKIVRSIQY LFASWGQVQT 420 SRPALSDRPA ASSKEDLKFL KESIFEYLSF MDMDIGRASA ARHKDKLEHL NAKLEQALAL 480 PSLNLSADFK ATLKVIHSEV LSFLAKNAEL KAKSTQYLRA VFEKESLRME INKAEDELKE 540 ISSEIMVEDS LMVNLVARIK ELQIRMDDCR ARMAAKKRNA SQGIERTKSL VEQYKKLEVD 600 DDVAAELNIT SSRQNED*

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MMAELEAAFD ATTMAGTSTD SSTLSRSTPE PHFASSLVNF ACREDLQKMQ LIQGMKARPD  60
GPSEPHQYQF PPETTRNATM FRPQMSVPWK ARSKRSRGAP AYWASRLSAV SPTPSTMSSS  120
SNSDKIKVKS NNAVTTEGGN GSRKCLHCAT DKTPQWRTGP MGPKTLCNAC GMRYKSGRFV  180
PEYRPAASPP FVLTKHSNSH RKVLELRRQK ELQEVQLHQQ QFLHQNMMFD ASDVYLTTVE  240
NAGQCLDQSS ISSPPPVLVT PLSIRSLSPS RRAKQSARPS SSLPAKPTTA KSAPSRKRPV  300
SASPILDDDD DAPLIVRRKK SSAFPSKALA STAPAPSSSA EAASSRPVDK GATLKETSSV  360
PESLSQPMDE PPSSQGVNPP NIEAEDLAED MPSSTIIDED ADKIVRSIQY LFASWGQVQT  420
SRPALSDRPA ASSKEDLKFL KESIFEYLSF MDMDIGRASA ARHKDKLEHL NAKLEQALAL  480
PSLNLSADFK ATLKVIHSEV LSFLAKNAEL KAKSTQYLRA VFEKESLRME INKAEDELKE  540
ISSEIMVEDS LMVNLVARIK ELQIRMDDCR ARMAAKKRNA SQGIERTKSL VEQYKKLEVD  600
DDVAAELNIT SSRQNED*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32890.1	1e-50	GATA family protein