PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu037780.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 529aa MW: 60356.1 Da PI: 5.8248

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu037780.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	89	5.4e-28	55	138	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+++e+laL+++r +m++++r++ lk+plW+evs+k+ e g++rs+k+Ckek+en+ k++k++keg+++r ++ +++++f+ le Oeu037780.1 55 RWPREETLALLKIRADMDRAFRDSILKAPLWDEVSRKLGELGYNRSAKKCKEKFENIYKYHKRTKEGRSSR--QNGKNYRFFELLE 138 8*******************************************************************8..45567**9886 PP
2	trihelix	102.4	3.4e-32	353	437	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev aLi +r++++ +++++ lk+plWee+s++m++ g+ rs+k+Ckekwen+nk+yk++k+++k+r +++s+tcpyf+ le Oeu037780.1 353 RWPKAEVEALIMLRTDLDLKYNDNGLKGPLWEEISSAMKKLGYDRSAKRCKEKWENINKYYKRVKDSNKRR-PQDSKTCPYFNMLE 437 8******************************************************************97.9********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MLDSSVFSEN SGVDGADGSG TSGGAAAHGV AVEPRNEGGS AEGGEYFDRN SPGNRWPREE 60 TLALLKIRAD MDRAFRDSIL KAPLWDEVSR KLGELGYNRS AKKCKEKFEN IYKYHKRTKE 120 GRSSRQNGKN YRFFELLEVF DNQLSVPLTP SNQVQTYLMK TTAASPLRVN PINASQDFRV 180 PCSNQDPDTE FISTSTSSSE ERSEGSVKRK RKLAEYFERL MKGVLKKQED LQNKFLESIE 240 KHEEDRKARE EAWKVQEMAR IKREQDFLAQ ERAVSAAKDA AVLAFLQKIS QYSTTLQMPE 300 IPFPIFEKHL DTRDNLLEKC IDKRQNGVGE TSNHTDKQEN GVGENTTLMC SSRWPKAEVE 360 ALIMLRTDLD LKYNDNGLKG PLWEEISSAM KKLGYDRSAK RCKEKWENIN KYYKRVKDSN 420 KRRPQDSKTC PYFNMLESIY AKKSKTEHTL ENSSYNMQPE RILFEMTGKQ QHQPPPPLPS 480 QQQHQSETED GENENQNQED NAEDEEDDDN GDGYQIVANV PFSLSTMG*

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MLDSSVFSEN SGVDGADGSG TSGGAAAHGV AVEPRNEGGS AEGGEYFDRN SPGNRWPREE  60
TLALLKIRAD MDRAFRDSIL KAPLWDEVSR KLGELGYNRS AKKCKEKFEN IYKYHKRTKE  120
GRSSRQNGKN YRFFELLEVF DNQLSVPLTP SNQVQTYLMK TTAASPLRVN PINASQDFRV  180
PCSNQDPDTE FISTSTSSSE ERSEGSVKRK RKLAEYFERL MKGVLKKQED LQNKFLESIE  240
KHEEDRKARE EAWKVQEMAR IKREQDFLAQ ERAVSAAKDA AVLAFLQKIS QYSTTLQMPE  300
IPFPIFEKHL DTRDNLLEKC IDKRQNGVGE TSNHTDKQEN GVGENTTLMC SSRWPKAEVE  360
ALIMLRTDLD LKYNDNGLKG PLWEEISSAM KKLGYDRSAK RCKEKWENIN KYYKRVKDSN  420
KRRPQDSKTC PYFNMLESIY AKKSKTEHTL ENSSYNMQPE RILFEMTGKQ QHQPPPPLPS  480
QQQHQSETED GENENQNQED NAEDEEDDDN GDGYQIVANV PFSLSTMG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-111	Trihelix family protein