PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037727.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 347aa    MW: 38193.6 Da    PI: 6.6724
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037727.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.51e-19270304135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  Cs+Cg+tkTp+WR gp g+ktLCnaCG++y++ +l
  Oeu037727.1 270 CSHCGVTKTPQWRAGPLGSKTLCNACGVRYKSGRL 304
                  *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MLYRTHHHPF LFSFNHFSHS SHPDLLSSSS SMQGMDCAQG ALRSRFGPEM GWKSAPQQSF  60
LDDILTVNGG QSGISGGDDS FVDDLLDFSN GFSETKEEEP EIDEQKTVND KSVAINNDSA  120
FSVKEDFESL PCSELSVPAE DLENLEWLSH FVEESFSEYS LTGKLPSNPP ENRSEPEISV  180
KEKPSFTTPV QTKARTKRTR TGVRIWPLGL PEPSSSSSSS TSSTTSFPVP NPYLVYAIPG  240
SQTAESLLRN PPVKRQKKKP TDGVGAPRRC SHCGVTKTPQ WRAGPLGSKT LCNACGVRYK  300
SGRLLPEYRP ACSPSFSIEL HSNNHRKVLE MRQKKEVEPA PVVPSF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253260VKRQKKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.29e-66GATA family protein