PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037284.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 348aa    MW: 37869 Da    PI: 9.021
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037284.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.93.5e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G+g W+tI +          R+  ++k++w++
      Oeu037284.1  5 KQKWTAEEEAALKAGVLKHGPGKWRTILKDPEfsgvlCLRSNVDLKDKWRN 55
                     79***********************************66**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV LKHGPGKWRT ILKDPEFSGV LCLRSNVDLK DKWRNMSVMA  60
NGWGSRDRAK LALKRMHQAA KHGESVSQSD EEIDDSTSPV SGPKRSIMRL DNLIIEAINN  120
LREPGGSNKT TIATYIEDQY WAPPNFKRML SGKLKHFVAN GKLIKMKRKY RMAPTASLSE  180
RRRNPSISIA SRRQGISPRT DCDDVSELSK SQIDLELAKM RSMTPEEAAA AAAQAVAEAE  240
AAMAEAEEAA QEAEAAEADA EAAQAFADAA SKTLKGRSTP SLTLACSHGN YCRNEALPPS  300
KRKRAFVCEL PWCTSVYAAF DVSSAACIAA LSFYAKSWIE NLTSSSV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.17e-91MYB_related family protein