PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu036693.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 168aa MW: 19127.3 Da PI: 8.4698

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu036693.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.7e-19	15	69	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++ ++t+eql+ Le+ F+ n ++++e++ +LA++lgL+ ++V +W+qNrRa+ k+ Oeu036693.1 15 HKKRLTQEQLRLLETSFNLNTKLDTERKSQLAQELGLPSTRVAIWYQNRRARNKN 69 67789***********************************************995 PP
2	HD-ZIP_I/II	97.2	1.6e-31	15	106	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl++eq++lLE+sF+ ++kL++erK++la+eLgl va+W+qnrRAR k++ lE d++aLk ++++++e+n+rL++ev++L+++l++ Oeu036693.1 15 HKKRLTQEQLRLLETSFNLNTKLDTERKSQLAQELGLPSTRVAIWYQNRRARNKNQSLEDDHKALKLKLETVMEDNARLQDEVQRLKQDLNK 106 79*************************************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MDNFQSRTQK HQLKHKKRLT QEQLRLLETS FNLNTKLDTE RKSQLAQELG LPSTRVAIWY 60 QNRRARNKNQ SLEDDHKALK LKLETVMEDN ARLQDEVQRL KQDLNKVREI FGTFNSSLSS 120 SCDDVGSSDL LNGSKNHLEK DLYASMVADG VPFGSSDGYD FFSSSVS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	2e-25	HD-ZIP family protein