PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu036024.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Protein Properties

Length: 287aa MW: 31414 Da PI: 8.0829

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu036024.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.8	1.1e-14	93	172	13	98
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 s l+lp fa++ g+ +++ l+d+sg++W+v+l + ++ ++kGW eF ++gLk+g ++ F+++ s f vv++f Oeu036024.1 93 SEHLCLPPAFAATVGNL--LEQETYLKDTSGQQWTVTL--SSVVDTLAFKKGWTEFFLSHGLKTGQVLEFHYIMGSHF--VVHIFG 172 3559*****999755..6669***********..88888999**********************977888..999985 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MVHHDSGCGR GRERGRGRGR GRGCGRGRGR DLGVGVELGP SRGHNRGRGH GRGRGRGRGR 60 NEYTSSYPTQ QDSSPIVTRF FKIIYENEEE NISEHLCLPP AFAATVGNLL EQETYLKDTS 120 GQQWTVTLSS VVDTLAFKKG WTEFFLSHGL KTGQVLEFHY IMGSHFVVHI FGTCGNEITE 180 FNSGEIINTV DEELADQDDA HQTFDVNLIN KPISNRGNTV SEIQPSVKKN SAEKCAATVK 240 YTESTRKSVS VDAKIPCFKG LQNDASQVLP GKELQKGLDG CPPQGF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	10	20	RGRERGRGRGR
2	12	22	RGRERGRGRGR
3	14	23	RGRGRGRGRG
4	18	27	RGRGRGRGRG
5	48	57	RGRGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01580.1	1e-09	B3 family protein