PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu035808.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 231aa    MW: 25893.2 Da    PI: 7.2766
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu035808.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.2e-1360106455
                  HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  +h e+Er+RR+++N  f  Lr ++P+ +      K++Ka+ L  A+ YI +Lq
  Oeu035808.1  60 NHVEAERQRREKLNRQFCALRAVVPNiS------KMDKASLLGDAIAYITELQ 106
                  799***********************66......*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MQIDFTGVTS RPIISSPLYA ESEHSDAETS CREDRAGVSD EKRPRKRGRK PSHGREEPIN  60
HVEAERQRRE KLNRQFCALR AVVPNISKMD KASLLGDAIA YITELQKKLK EMESGVEKHE  120
SISRKALIFE TKPNSKLQDQ VPRIEVQSVH DQVIVRVLSP LDAHPVSNII QAFQDAHVNI  180
LESNIATGTD AVFHTFVVKS QGSDQLTREK LMQLFSRESN SSELPISSVD *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14250KRPRKRGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46510.11e-68bHLH family protein