PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035807.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 564aa MW: 63445.4 Da PI: 6.7947

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035807.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.3e-12	393	439	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h +Er+RR+++N f Lr ++P+ + K++Ka+ L A+ YI +Lq Oeu035807.1 393 NHVVAERQRREKLNRQFCALRAVVPNiS------KMDKASLLGDAIAYITELQ 439 6999********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MGNDEYLHNK LSDLVESPNT ANFSWNYAIF WQISRSKLSG DLVLGWGDGC CREPYEGEES 60 LGARIQNMRP QDETQQRTRK SVLQKLHTLF GGTDEDSYAF GLDKVTDIEM FFLASMYFSF 120 PRGECGPGKC FESGKHVWLW DAFNSSQDYC VRSFLSRSAH MQTIVLIPID VGVVELGSVR 180 SIPENLKLLQ EIGSRFSSFS ALNRAEQIES SMVPTDGRHE SGPGSELVIG NWPEVIPKIF 240 GLDLNSNGGG LREKLAVQEV EDRPCHKYAN GSRFQFAANG LHRATWMQNS NVNPGNLLEL 300 STPQKTAKNQ NQMVNESREE FRLTNFRNRK PKQMQIDFTG VTSRPIISSP LYAESEHSDA 360 ETSCREDRAG VSDEKRPRKR GRKPSHGREE PINHVVAERQ RREKLNRQFC ALRAVVPNIS 420 KMDKASLLGD AIAYITELQK KLKEMESGVE KHESISRKAL IFETKPNSKL QDQVPRIEVQ 480 SVHDQVIVRV LSPLDAHPVS NIIQAFQDAH VNILESNIAT GTDAVFHTFV VKSQGSDQLT 540 REKLMQLFSR ESNSSELPIS SVD*

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MGNDEYLHNK LSDLVESPNT ANFSWNYAIF WQISRSKLSG DLVLGWGDGC CREPYEGEES  60
LGARIQNMRP QDETQQRTRK SVLQKLHTLF GGTDEDSYAF GLDKVTDIEM FFLASMYFSF  120
PRGECGPGKC FESGKHVWLW DAFNSSQDYC VRSFLSRSAH MQTIVLIPID VGVVELGSVR  180
SIPENLKLLQ EIGSRFSSFS ALNRAEQIES SMVPTDGRHE SGPGSELVIG NWPEVIPKIF  240
GLDLNSNGGG LREKLAVQEV EDRPCHKYAN GSRFQFAANG LHRATWMQNS NVNPGNLLEL  300
STPQKTAKNQ NQMVNESREE FRLTNFRNRK PKQMQIDFTG VTSRPIISSP LYAESEHSDA  360
ETSCREDRAG VSDEKRPRKR GRKPSHGREE PINHVVAERQ RREKLNRQFC ALRAVVPNIS  420
KMDKASLLGD AIAYITELQK KLKEMESGVE KHESISRKAL IFETKPNSKL QDQVPRIEVQ  480
SVHDQVIVRV LSPLDAHPVS NIIQAFQDAH VNILESNIAT GTDAVFHTFV VKSQGSDQLT  540
REKLMQLFSR ESNSSELPIS SVD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	375	383	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-156	bHLH family protein