PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035778.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 1089aa MW: 120260 Da PI: 7.4454

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035778.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.1	7.8e-41	157	234	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls ak+yhrrhkvCevhska+++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ Oeu035778.1 157 MCQVDNCKEDLSMAKDYHRRHKVCEVHSKASKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 234 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 1089 aa Download sequence
MEEVGAQVAS PILIQQSLAG RFCDARPMAK KRNLPFQSAS FPHQIPLDNW NPTSWDWDSA 60 RFVARPSQSD VVRGGSATPA PLKVSTHKGV QNNTADPKNA VPVEDGNDNE NLRLKLGADG 120 DGDGRNGVLT LVEEPQLVSR PNKRVRSGSP SGASYPMCQV DNCKEDLSMA KDYHRRHKVC 180 EVHSKASKAL VGKQMQRFCQ QCSRFHPLSE FDEGKRSCRR RLAGHNRRRR KTQPDDATSR 240 LLVPENHDQS GNSDLDIVNL LAVLARAQGN TEDRSSKISY VPDKDQLIQL LSKINSLPLP 300 SNLAAQLPVM GGLDGRIPNL ISSGNMNRLN GNVSLPSTKD LLAVLSENPA AAPSSDVIEI 360 QSQPSSDGSD SEKSKSAFVE QATSLHLQKR PTLAFPSVGG ERSSTSYHSP VADSDCYVQE 420 TCPNLKLQLY NSSPEDDSLR KLPSGRNYFS SDSSNPSQER SPSSSPPVVH DLFPMHTSRE 480 PMKPDSVSNS EVNTMYAKAT TVNQCNTSLQ LFGASKRAAE NGSIQSFPHQ AGYTSSSGSD 540 HSPSSLNSGA QDRNGRIVFK LFDKDPSHLP GSLRAQIYNW LSNSPSEMES YIRPGCIVLS 600 VYLSMSSYAW DRLEGKLLDY VKSLVNDINT DFWRNGRFLV HTDEQMASYK DGKIHLCKSW 660 RAWNTPELIL VSPVAVVGGQ EASLLLKGKN LTIPGTKIYC THTTGYNMKE FPAVACQKTV 720 YDEIILDSFK IHGASSSVLG RCFIEVENGS RGTSFPIIIA DNTICQELRL LESVINEGAE 780 LHDVISSDYI QNPDRPRTRE EVLHFLDELG WLFQRKYNSS LFESPDYRLS RFTFLLTFSV 840 EHDFCALTKT LLDILREINF GREELARESL EMLSKIHLLN RAINRRCRRM VDLLIHYSIS 900 DSTDSSMKYI FLPNLAGPGG ITPLHLAAST LGSDDMVDAL TSDPQEIGLH CWKSVLDANG 960 MSPYAYALMR NNHSYNTLVA QKLADKKNDQ VSVSIGNEIE QFVMEVDRGH KNTFHINQGQ 1020 KSCSRCAAAA GRYSGKFPGS QGLLQRPYIH SMLAIAAVCV CVCLFFRGAP DIGSVAPFKW 1080 ENLGYGPL*

Sequence ? help Back to Top

Protein Sequence Length: 1089 aa Download sequence

MEEVGAQVAS PILIQQSLAG RFCDARPMAK KRNLPFQSAS FPHQIPLDNW NPTSWDWDSA  60
RFVARPSQSD VVRGGSATPA PLKVSTHKGV QNNTADPKNA VPVEDGNDNE NLRLKLGADG  120
DGDGRNGVLT LVEEPQLVSR PNKRVRSGSP SGASYPMCQV DNCKEDLSMA KDYHRRHKVC  180
EVHSKASKAL VGKQMQRFCQ QCSRFHPLSE FDEGKRSCRR RLAGHNRRRR KTQPDDATSR  240
LLVPENHDQS GNSDLDIVNL LAVLARAQGN TEDRSSKISY VPDKDQLIQL LSKINSLPLP  300
SNLAAQLPVM GGLDGRIPNL ISSGNMNRLN GNVSLPSTKD LLAVLSENPA AAPSSDVIEI  360
QSQPSSDGSD SEKSKSAFVE QATSLHLQKR PTLAFPSVGG ERSSTSYHSP VADSDCYVQE  420
TCPNLKLQLY NSSPEDDSLR KLPSGRNYFS SDSSNPSQER SPSSSPPVVH DLFPMHTSRE  480
PMKPDSVSNS EVNTMYAKAT TVNQCNTSLQ LFGASKRAAE NGSIQSFPHQ AGYTSSSGSD  540
HSPSSLNSGA QDRNGRIVFK LFDKDPSHLP GSLRAQIYNW LSNSPSEMES YIRPGCIVLS  600
VYLSMSSYAW DRLEGKLLDY VKSLVNDINT DFWRNGRFLV HTDEQMASYK DGKIHLCKSW  660
RAWNTPELIL VSPVAVVGGQ EASLLLKGKN LTIPGTKIYC THTTGYNMKE FPAVACQKTV  720
YDEIILDSFK IHGASSSVLG RCFIEVENGS RGTSFPIIIA DNTICQELRL LESVINEGAE  780
LHDVISSDYI QNPDRPRTRE EVLHFLDELG WLFQRKYNSS LFESPDYRLS RFTFLLTFSV  840
EHDFCALTKT LLDILREINF GREELARESL EMLSKIHLLN RAINRRCRRM VDLLIHYSIS  900
DSTDSSMKYI FLPNLAGPGG ITPLHLAAST LGSDDMVDAL TSDPQEIGLH CWKSVLDANG  960
MSPYAYALMR NNHSYNTLVA QKLADKKNDQ VSVSIGNEIE QFVMEVDRGH KNTFHINQGQ  1020
KSCSRCAAAA GRYSGKFPGS QGLLQRPYIH SMLAIAAVCV CVCLFFRGAP DIGSVAPFKW  1080
ENLGYGPL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein