PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035640.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

FAR1

Protein Properties

Length: 555aa MW: 64344.3 Da PI: 8.873

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035640.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.3	8.8e-07	16	83	28	90
FAR1 28 itkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkle.leHnHela 90 + +f C ++g+ + + ++ ++k+rrt+ ++++gC l+ +k +g + + k++ HnH++a Oeu035640.1 16 KPRIDFACERHGSYRCRYTNkeneKRKRRRTNGTKKCGCPFALNGRKLINGDYWILKVKcGRHNHDIA 83 557789****98887777555556667788888999999988888888888888888689*986 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MIVVIKKSNF GQVGRKPRID FACERHGSYR CRYTNKENEK RKRRRTNGTK KCGCPFALNG 60 RKLINGDYWI LKVKCGRHNH DIAQNLEGHS YAGRLTEKET SILVDMSKNH VRLKEILYTL 120 KQNDDTNVST MRHIYNARQK FRLKEQAGRT QMQQLMNRLV ENKYIEWHCI SMEMNLVQDL 180 FWAHPYSVDL LQAFPRVIIM DCTYKINRYR LPLLEIVGVT SIDLTFSIAF AYLGKECEEN 240 YAWALGRLKS LMNDIIMPSV IVTFKPTLFK KLRGFTSRIA MNMIFQESKR ADDIGTDKVT 300 CGCVIRQTHE LPCAHEISEN KKESQPIPLS RVHSHWKKFN LVPLDKGNTF EINCASLFEM 360 IEKRYQDNND HVKAEILQKL KEIATPSSIS LVEPQVQTKT KGLHFDLFPI RLRPYIVDVQ 420 DVAADGNCDF QAVANILGIG EENWSLVRKD LIKELESHFD DYSRLYGNDD MIYELIHSLS 480 HFDGSASREY WMTMPNMGHV IASRYKIILV HLSQQYLTFL PFWDEPLAIA SHKIVAIGFV 540 NDCHFISVNI HQIN*

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MIVVIKKSNF GQVGRKPRID FACERHGSYR CRYTNKENEK RKRRRTNGTK KCGCPFALNG  60
RKLINGDYWI LKVKCGRHNH DIAQNLEGHS YAGRLTEKET SILVDMSKNH VRLKEILYTL  120
KQNDDTNVST MRHIYNARQK FRLKEQAGRT QMQQLMNRLV ENKYIEWHCI SMEMNLVQDL  180
FWAHPYSVDL LQAFPRVIIM DCTYKINRYR LPLLEIVGVT SIDLTFSIAF AYLGKECEEN  240
YAWALGRLKS LMNDIIMPSV IVTFKPTLFK KLRGFTSRIA MNMIFQESKR ADDIGTDKVT  300
CGCVIRQTHE LPCAHEISEN KKESQPIPLS RVHSHWKKFN LVPLDKGNTF EINCASLFEM  360
IEKRYQDNND HVKAEILQKL KEIATPSSIS LVEPQVQTKT KGLHFDLFPI RLRPYIVDVQ  420
DVAADGNCDF QAVANILGIG EENWSLVRKD LIKELESHFD DYSRLYGNDD MIYELIHSLS  480
HFDGSASREY WMTMPNMGHV IASRYKIILV HLSQQYLTFL PFWDEPLAIA SHKIVAIGFV  540
NDCHFISVNI HQIN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	45	KRKRRR
2	41	45	RKRRR
3	41	46	RKRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-07	FAR1 family protein