PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035478.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 258aa MW: 28237.6 Da PI: 7.8261

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035478.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00056	110	132	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Oeu035478.1 110 YECKTCNRTFPSFQALGGHRASH 132 99**********99999998887 PP
2	zf-C2H2	13.9	0.00016	181	203	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H Oeu035478.1 181 HECSICGSEFSSGQALGGHMRRH 203 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MEIEMLEEFT KYQDQMILKR KRTKQLRPSH SSSSSGGGCG GNRGGGNGFR SLVSSPTTSS 60 GISTSTEEDE DMANCLILLA QSGDKVEKFS SRKFTEMANI TQGKVGIYVY ECKTCNRTFP 120 SFQALGGHRA SHKKPKSSSD NQKKSSPFDH NEEEKKLIIA SLSPPPSIQS SGKVEIKPKI 180 HECSICGSEF SSGQALGGHM RRHRTAPNTT RIGTDDSEEP RNILALDLNL PAPLEDDHRP 240 DEKFLIFSSP ALVDCHY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	18	25	LKRKRTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	3e-50	C2H2 family protein