PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu035300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 223aa MW: 24773.5 Da PI: 5.1319 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 51.9 | 3.2e-16 | 1 | 70 | 29 | 97 |
GAGA_bind 29 mssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla.salpv 97 m++ aerda+irern+al e+k a+aerdma lqrd+a+aern+a+ +rd++++al+++e s++ ++ p Oeu035300.1 1 MAITAERDAAIRERNMALEERKRAFAERDMAMLQRDAAIAERNAAIQDRDEAIAALQFRESSMNdNTVPD 70 78899********************************************************998533333 PP | |||||||
2 | GAGA_bind | 233.6 | 1.4e-71 | 87 | 222 | 168 | 301 |
GAGA_bind 168 kkksekskkkvkkesad...erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSq 262 + ++s+++ + +d +++ ++k +l+ln++++Des++PvPvC+CtG+++ CY+WGnGGWqSaCCtttiS+yPLP+++++r +R++grKmS+ Oeu035300.1 87 NSDASNSWSNGHDFDCDeddLDKQVSWK-DNLGLNQINFDESAMPVPVCTCTGSPQPCYRWGNGGWQSACCTTTISMYPLPQVANKRYTRVGGRKMSG 183 3333444444443333321133555555.59******************************************************************* PP GAGA_bind 263 gafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +af klL++Laa+Gyd+s+p+DLkdhWAkHGtn++ t++ Oeu035300.1 184 SAFGKLLNRLAADGYDFSTPLDLKDHWAKHGTNRYSTLK 222 ***********************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MAITAERDAA IRERNMALEE RKRAFAERDM AMLQRDAAIA ERNAAIQDRD EAIAALQFRE 60 SSMNDNTVPD SLGNDITRAE SFSKQVNSDA SNSWSNGHDF DCDEDDLDKQ VSWKDNLGLN 120 QINFDESAMP VPVCTCTGSP QPCYRWGNGG WQSACCTTTI SMYPLPQVAN KRYTRVGGRK 180 MSGSAFGKLL NRLAADGYDF STPLDLKDHW AKHGTNRYST LK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 9e-76 | BBR-BPC family protein |