PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu035280.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 24892.2 Da PI: 4.8641 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1e-19 | 19 | 68 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +gr++AeIrdp++ + r++lg+f+taeeAa a+++a+++++g Oeu035280.1 19 KYLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAALSMRG 68 799******.**********965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MNPFKSSINS ARQKQTGGKY LGVRRRPWGR YAAEIRDPTT KERHWLGTFD TAEEAALAYD 60 RAALSMRGSG ARTNFCYSES DVVMPAAGNS SVADNHFSEQ TPQLMIAADC PNEESSSVSE 120 PSSLWPGYTL GDSVYQQQVS VSETNQALSN SHQTLDVMQS PGYVEGHHNQ GEWTSSLFGY 180 DEARRGSPSS LLFDSSYVHS PLFSQMPPVS DADSLATFNL GSSAYFF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 2e-27 | ERF family protein |