PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035242.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 279aa MW: 29352.8 Da PI: 9.1227

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035242.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.5	2.3e-38	28	119	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....k 89 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a+ s s++ +s++ + Oeu035242.1 28 APKRSSSKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGVSISQQGNSISagihQ 119 789******************************************************************99866666666665555544431 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MSENKSAEMK DFQIVVAEKE EGKKQALAPK RSSSKDRHTK VEGRGRRIRM PALCAARIFQ 60 LTRELGHKSD GETIQWLLQQ AEPSIIAATG TGTIPASALA AAGVSISQQG NSISAGIHQK 120 MDEFGGHMGG SGGGGGGNRS SWPMVNLGRP HMASAGIWPP AVSGFGFQSS SSSSSGPSTV 180 NLGSEGSNYL QKIGFPGFDL PSSNMGPMSF TSILGATNQQ LPGLELGLSQ DSHIGVLNPQ 240 AMNQLYQQMG ESRMHPQQQQ HQLQQQPSPK DDSQGSGQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-71	TCP family protein