PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034842.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 479aa MW: 51975.3 Da PI: 8.9872

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034842.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.7	1.1e-12	106	150	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + k+lG+g+W+ Iar +Rt+ q+ s+ qky Oeu034842.1 106 PWTEEEHRMFLLGLKKLGKGDWRGIARNYVITRTPTQVASHAQKY 150 8***************************89**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLTHYMGG GGSGSGSGTP 60 LNGVAHDSPA DTPDHPSSGS GVADGYASED FVAGSSSSRE RKKGVPWTEE EHRMFLLGLK 120 KLGKGDWRGI ARNYVITRTP TQVASHAQKY FIRQSNISRR RRRSSLFDIV ADESADNPVV 180 SRDFFPVDLP QAEPQSSNAF PPLPADEECE SMESANSNDG EAVLPKPEGA QFSYPVVYPA 240 YVAPFFPLSI PFWPGYNQEP VKEETHEVLK PTAVHSKSPI NVDELVGMSK LSLGETIGDS 300 GPSSLSLKLV EGSTRPSAFH AKPGTGGSGV TPLVKPLRNN CHTTPTCPSP SRNTSEKQPR 360 DSPKCHVFIR SGFEVMPTPD NLNMARCKVK SRSTEVIEVS LNSEALNTPR HSLNRSLRHH 420 SLFQSLNVDL TVGVYAAAVA TTAGFDRVLL TVRCYAQKGL RRIAIRWSCG ESNFRCQQ*

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLTHYMGG GGSGSGSGTP  60
LNGVAHDSPA DTPDHPSSGS GVADGYASED FVAGSSSSRE RKKGVPWTEE EHRMFLLGLK  120
KLGKGDWRGI ARNYVITRTP TQVASHAQKY FIRQSNISRR RRRSSLFDIV ADESADNPVV  180
SRDFFPVDLP QAEPQSSNAF PPLPADEECE SMESANSNDG EAVLPKPEGA QFSYPVVYPA  240
YVAPFFPLSI PFWPGYNQEP VKEETHEVLK PTAVHSKSPI NVDELVGMSK LSLGETIGDS  300
GPSSLSLKLV EGSTRPSAFH AKPGTGGSGV TPLVKPLRNN CHTTPTCPSP SRNTSEKQPR  360
DSPKCHVFIR SGFEVMPTPD NLNMARCKVK SRSTEVIEVS LNSEALNTPR HSLNRSLRHH  420
SLFQSLNVDL TVGVYAAAVA TTAGFDRVLL TVRCYAQKGL RRIAIRWSCG ESNFRCQQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47390.1	1e-114	MYB_related family protein