PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034833.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 322aa MW: 35894.6 Da PI: 8.7791

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034833.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.5	9.4e-18	164	218	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k Oeu034833.1 164 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 218 788899***********************************************98 PP
2	HD-ZIP_I/II	127.9	4.4e-41	164	253	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+ke +eLr +l Oeu034833.1 164 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCEKLTDENRRLQKEIQELR-AL 253 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MELGLSLGET SKGFTLPRKS QKIIDEDDLG FCMALGMKGE YEIKKKETRN DGERKGSSSD 60 LPLQLDLLPF SPVPRSQNSP NLRFPWLAQN LVTESGKGLD ENQRNLTAVE VEDGAALSSP 120 NSTVSSFQMD FSIYTRGKRD ANEVEADRGA SSKASDEEEN GMARKKLRLS KEQSAFLEES 180 FKEHNTLNPK QKLALAKQLN LRPRQVEVWF QNRRARTKLK QTEVDCEYLK RCCEKLTDEN 240 RRLQKEIQEL RALKASQPFY MQQPATTLAM CPSCERVTTS TATPSITTAA TTTAAMNSTN 300 NGLSLAKPKL YSFLHAQQAA S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	221	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	3e-74	HD-ZIP family protein