PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu034580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 174aa MW: 19575.2 Da PI: 8.3843 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.3e-20 | 33 | 82 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd s+++ + r++lg+f+tae Aa a+++a+++++g Oeu034580.1 33 YRGVRRRP-WGKYAAEIRD-STRN-SERVWLGTFDTAEAAALAYDQAALAMRG 82 9*******.**********.3433.6*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 174 aa Download sequence |
MVLYGVLAEA GGVDSSSERT NQMQYSPEKE VMYRGVRRRP WGKYAAEIRD STRNSERVWL 60 GTFDTAEAAA LAYDQAALAM RGSTAVLNFS TDVVYESLKE MKYDFEVGRS PVLALKKRHS 120 MKRKAVSNKK KKEKEPRLEN FVVLEDLGSE YLEELLCLSE NSFATIRSIG SLE* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 116 | 132 | KKRHSMKRKAVSNKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-39 | ERF family protein |