PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034296.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 516aa MW: 56681.2 Da PI: 7.8961

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034296.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	6.8e-09	337	384	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Oeu034296.1 337 AHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 384 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MEKENMFLNC GSEQFQNFFW ENSMDQNDPF ESALSSMVSS PAASNAAGAG KNGGENIVIR 60 ELIGRLGSIC NSGEISPQPG NRSTNTSCYS TPLNSPPKVN LSMMDNQIRG NLQIPGNNFP 120 SFTPFSTDPG FAERAARYSC FAKLGLNNDS ELPHRLKPKL DSGNISRVSS NQSFKISGSP 180 QIGVQEKQNA PLQEGISASD KRFGRFSRSS TPEKTEFGDS RENSSVSEQI PVGGNVIKGQ 240 IFSNSRKRKS VPRGKAKEIP AKDANVASES SESSAKRSRS DDEGSIEKGN AKKADVNEFD 300 KAIGDGNQKQ SKENTKPPEP PKDYIHVRAR RGQATDAHSL AERVRREKIS ERMKFLQDLV 360 PGCNKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATINPR MEFNMEALMS KDMFGSRGSL 420 LHNLYTSDAY PVQSQPGQNL HNIIPNGTEM PLQNTPISRN QSIQMPPLDN ASEPVSQVST 480 FWEDDLQSLV QMGFGQNETQ SFHGILPTAQ MKVEQ*

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MEKENMFLNC GSEQFQNFFW ENSMDQNDPF ESALSSMVSS PAASNAAGAG KNGGENIVIR  60
ELIGRLGSIC NSGEISPQPG NRSTNTSCYS TPLNSPPKVN LSMMDNQIRG NLQIPGNNFP  120
SFTPFSTDPG FAERAARYSC FAKLGLNNDS ELPHRLKPKL DSGNISRVSS NQSFKISGSP  180
QIGVQEKQNA PLQEGISASD KRFGRFSRSS TPEKTEFGDS RENSSVSEQI PVGGNVIKGQ  240
IFSNSRKRKS VPRGKAKEIP AKDANVASES SESSAKRSRS DDEGSIEKGN AKKADVNEFD  300
KAIGDGNQKQ SKENTKPPEP PKDYIHVRAR RGQATDAHSL AERVRREKIS ERMKFLQDLV  360
PGCNKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATINPR MEFNMEALMS KDMFGSRGSL  420
LHNLYTSDAY PVQSQPGQNL HNIIPNGTEM PLQNTPISRN QSIQMPPLDN ASEPVSQVST  480
FWEDDLQSLV QMGFGQNETQ SFHGILPTAQ MKVEQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	250	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48560.1	6e-78	bHLH family protein