PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033311.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 299aa    MW: 34313.2 Da    PI: 4.7816
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033311.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.64.3e-1881134356
                  --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  k++++ ++q++ Le+ Fe ++++  e++ +LAk+lgL+ rqV +WFqNrRa++k
  Oeu033311.1  81 KKRRLMPDQVQFLEKSFEVENKLEPERKLRLAKELGLQPRQVAIWFQNRRARYK 134
                  4567889**********************************************9 PP
2HD-ZIP_I/II120.86.9e-3980171192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ekkrrl  +qv++LE+sFe e+kLeperK +la+eLglqprqva+WFqnrRAR+ktk+lEk+y++Lk+++d+lk++ ++  ke+e+L++e++
  Oeu033311.1  80 EKKRRLMPDQVQFLEKSFEVENKLEPERKLRLAKELGLQPRQVAIWFQNRRARYKTKHLEKEYDSLKQSFDKLKADYDSHFKENEKLKDEVR 171
                  69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MEDPRVCDGS NMNNVLCKNE RLLCSSEVLD SLWITNSSSS FHGSTSMVNF ENVQGVENTE  60
RSFFPEIDKQ ENGDDDYQSE KKRRLMPDQV QFLEKSFEVE NKLEPERKLR LAKELGLQPR  120
QVAIWFQNRR ARYKTKHLEK EYDSLKQSFD KLKADYDSHF KENEKLKDEV RLLSEKLLSR  180
DKGKRKPEPL DNAKPKKPNL SRACPIIPVG FSKQEDASSA KSDVSDSDNH SMLVELADSS  240
QVFEQDPSDF SQDEDDSLSR SLLLPFPKVE AECYGDLQPN SCNLGFPVEA QGTWLWPY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.15e-40HD-ZIP family protein