PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033155.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 150aa    MW: 17126.2 Da    PI: 10.2582
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033155.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.77e-321470158
    CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                 +ep+YVNaKQy++I++RRq Rak+e ++k+ +++rkpy heSRh hA+rR+Rg+gGrF
  Oeu033155.2 14 EEPVYVNAKQYHGIMRRRQWRAKAELQNKV-TRARKPYQHESRHLHAMRRARGCGGRF 70
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MHHDRMVLPI VMSEEPVYVN AKQYHGIMRR RQWRAKAELQ NKVTRARKPY QHESRHLHAM  60
RRARGCGGRF ANTKKADTAA NNATCEKGNS SGDSISTKAH FLLGSESGNT ISSIQDKSSS  120
NYDELKRLSN QESRSYEFLQ CYDHKWPSQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.12e-30NF-YA family protein