PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu032817.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 1439aa MW: 160795 Da PI: 7.1386

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu032817.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	1324	1349	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kC+ C +sF++k +L H r+ + Oeu032817.2 1324 HKCEleGCRMSFKTKAELLLHKRNqC 1349 79********************9877 PP
2	zf-C2H2	11.3	0.0011	1407	1433	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg +F+ s++ rH r+ H Oeu032817.2 1407 YVCKveGCGLTFRFVSDFSRHRRKtgH 1433 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1439 aa Download sequence
MKDVELPKWL KGLPMAPEFR PTDTEFADPI AYISKIEKEA SAFGICKIIP PLPKPSKKYV 60 LYNLNKSLSK CPELGSDLNL ITKSKTDNAD KGNHNVNESR AVFTTRHQEL GSEKGRKEKG 120 VGCQVSGAQK QVWQSGEVYT LEQFEAKSKN FAKGQFGMVK EVNPLIVEAM FWRVASGEKP 180 VYVEYANDVP GSGFGEPVGS LRHFYRHKRR RRRKRKSFNR NNLGSSDSKD DHVDALNSGS 240 IDNVSDNQKD IGSCKETASN SLPSMQSHQA ESFSGHKDLN CIGEMEGTAG WKLSNSPWNL 300 QVIARSAGSL TRFMPDDIPG VTSPMVYVGM LFSWFAWHVE DHELHSLNFL HMGAPKTWYA 360 VPGDYAFNFE EVIRLYGYGG NTDRLAALTL LGEKTTVLSP EVIVASNIPC CRLVQYPGEF 420 VVTFPRAYHI GFSHGFNCGE AANFGTPEWL AIAKEAAVRR AAMNYLPMLS HQQLLYLLTM 480 SFISRIPRSL LPGVRSSRHR DRQKEEREFL VKKAFIEDIL NENNLLTILL QRNSLYRVVL 540 WDLELLPSSS KESESGNGVD AAISTSSEKA YPENDDNQDH FSQLTSCINA VDFDLDDDDL 600 AYDFHMDSGT LPCVACGILG FPFMAVVQPS VEASKTLLLE DHHTIEDLEV SKPVVESSQC 660 IHSPVEQSPI SDHTSSSKYD AASSKVKTAT GWNISGGFEK PRMFCLEHAI EIEGLLSTKG 720 GANVLVICHS DFKKINAHTA AIAEEISTPF NYNDIPLDGA SQEDLYLIDI AIDREEQTGC 780 IEDWTSQMSI NLQHCVKVKK NFPSKNVKHL LTLGGLLSGA TPDLNSSSFY WKSRKLRTKR 840 HLKHPLVSKP SDLKITKEED DLRSKLEHQT ARKEVEVIQY SRRKYKSHNS AKVNEPPKDS 900 NDCVLQNVPA AYNVDQKKEA KRTAESIHVG LENIEQTNPG LSTLASGGQS EYECIKFSQA 960 GGCEYSLPSQ CANSFISAMP VVENVAAQTL LCSSDELIVK ETVCSTTWHD PELQHEIKVG 1020 DENFEKNKRC YLDDSNCSPA AEAGRCHSGN FSGSVVSAQG NRKNVNVREK HILKETENEV 1080 SDTLNCQGHN KVHRGADNKE KAVPQVLDTL NCVGHNKVHG DADNKEKAAP VRKQEIQTDG 1140 ENKDTDVSMG RLEIQKGGDN LEKAVFECRQ VNQSDRDNQN KAVSIGTGLV EEFTSTSVEE 1200 LHVASNIYAA MASYGDNDMD VSLLEQREPN YSKCTSVQPE PTAESGRKRK REIDLLTQDQ 1260 LQVGGFIISP CESLRPRVRK DASVSGTDFR KPVEEKLPLT KARRKASADS LPHKDKKEHE 1320 TRPHKCELEG CRMSFKTKAE LLLHKRNQCP VDGCRKKFNS HKYAVQHQRV HDDDRPLKCP 1380 WKGCTMSFKW AWARTEHLRV HTGERPYVCK VEGCGLTFRF VSDFSRHRRK TGHQVKIS*

Sequence ? help Back to Top

Protein Sequence Length: 1439 aa Download sequence

MKDVELPKWL KGLPMAPEFR PTDTEFADPI AYISKIEKEA SAFGICKIIP PLPKPSKKYV  60
LYNLNKSLSK CPELGSDLNL ITKSKTDNAD KGNHNVNESR AVFTTRHQEL GSEKGRKEKG  120
VGCQVSGAQK QVWQSGEVYT LEQFEAKSKN FAKGQFGMVK EVNPLIVEAM FWRVASGEKP  180
VYVEYANDVP GSGFGEPVGS LRHFYRHKRR RRRKRKSFNR NNLGSSDSKD DHVDALNSGS  240
IDNVSDNQKD IGSCKETASN SLPSMQSHQA ESFSGHKDLN CIGEMEGTAG WKLSNSPWNL  300
QVIARSAGSL TRFMPDDIPG VTSPMVYVGM LFSWFAWHVE DHELHSLNFL HMGAPKTWYA  360
VPGDYAFNFE EVIRLYGYGG NTDRLAALTL LGEKTTVLSP EVIVASNIPC CRLVQYPGEF  420
VVTFPRAYHI GFSHGFNCGE AANFGTPEWL AIAKEAAVRR AAMNYLPMLS HQQLLYLLTM  480
SFISRIPRSL LPGVRSSRHR DRQKEEREFL VKKAFIEDIL NENNLLTILL QRNSLYRVVL  540
WDLELLPSSS KESESGNGVD AAISTSSEKA YPENDDNQDH FSQLTSCINA VDFDLDDDDL  600
AYDFHMDSGT LPCVACGILG FPFMAVVQPS VEASKTLLLE DHHTIEDLEV SKPVVESSQC  660
IHSPVEQSPI SDHTSSSKYD AASSKVKTAT GWNISGGFEK PRMFCLEHAI EIEGLLSTKG  720
GANVLVICHS DFKKINAHTA AIAEEISTPF NYNDIPLDGA SQEDLYLIDI AIDREEQTGC  780
IEDWTSQMSI NLQHCVKVKK NFPSKNVKHL LTLGGLLSGA TPDLNSSSFY WKSRKLRTKR  840
HLKHPLVSKP SDLKITKEED DLRSKLEHQT ARKEVEVIQY SRRKYKSHNS AKVNEPPKDS  900
NDCVLQNVPA AYNVDQKKEA KRTAESIHVG LENIEQTNPG LSTLASGGQS EYECIKFSQA  960
GGCEYSLPSQ CANSFISAMP VVENVAAQTL LCSSDELIVK ETVCSTTWHD PELQHEIKVG  1020
DENFEKNKRC YLDDSNCSPA AEAGRCHSGN FSGSVVSAQG NRKNVNVREK HILKETENEV  1080
SDTLNCQGHN KVHRGADNKE KAVPQVLDTL NCVGHNKVHG DADNKEKAAP VRKQEIQTDG  1140
ENKDTDVSMG RLEIQKGGDN LEKAVFECRQ VNQSDRDNQN KAVSIGTGLV EEFTSTSVEE  1200
LHVASNIYAA MASYGDNDMD VSLLEQREPN YSKCTSVQPE PTAESGRKRK REIDLLTQDQ  1260
LQVGGFIISP CESLRPRVRK DASVSGTDFR KPVEEKLPLT KARRKASADS LPHKDKKEHE  1320
TRPHKCELEG CRMSFKTKAE LLLHKRNQCP VDGCRKKFNS HKYAVQHQRV HDDDRPLKCP  1380
WKGCTMSFKW AWARTEHLRV HTGERPYVCK VEGCGLTFRF VSDFSRHRRK TGHQVKIS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	215	RHKRRRRRKR
2	208	213	KRRRRR
3	208	214	KRRRRRK
4	208	216	KRRRRRKRK
5	209	215	KRRRRRK
6	210	216	KRRRRRK
7	210	216	RRRRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein