PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu032183.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 647aa    MW: 71267.4 Da    PI: 5.9201
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu032183.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS331.71.4e-1012876452374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  +++L+++Ae v++g+ + aq +Larl+++ sp g+p+ R+a+y +eAL+  l+   ++  +++++s+ s    + ++ a+k+fse+sP+++f+++t+N
  Oeu032183.1 287 IDQLYKAAELVQTGNPAPAQGILARLNHQLSPIGKPFYRAAFYCKEALQLLLHT-NDNANSTVTASPFS---LIFKIGAYKAFSEISPVVQFANFTCN 380
                  689*************************************************98.88888888888888...************************** PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee.Lrv 196
                  qa+le +eg +r+Hi+Dfdi++G+QW++L+q+La R+ g+psl+iT ++s++++++ el+ t+e+L +fA+e+++ fef v+ +++l++ + ++ ++v
  Oeu032183.1 381 QALLEVFEGFDRIHIVDFDIGYGGQWASLMQELALRSIGTPSLKITSFASSSTHDQLELSLTRENLIQFANEINIAFEFVVMSVDSLNSSSWSMpFHV 478
                  *********************************************************************************98888888876654799 PP

         GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                   ++E++aVnl +     +  ++s+    + +L++vk+lsPk+vv v++ +d+++ +F +++++al+ ys l++sl+a    + +   k+Er +l+  i
  Oeu032183.1 479 PENEVVAVNLPVGSLASY--QLSI----PLILHFVKQLSPKIVVSVDRGCDRTDLPFPNHIIHALQSYSNLLESLDAV-NVNMDVLEKIERLFLRSGI 569
                  99*********9766665..4444....56*********************************************665.45778999*********** PP

         GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +++v+ + ++     e+ ++Wr  + ++GF+p+++s+++++qa++l++k++++g++ve+++ slvl+W++++L+s+SaWr
  Oeu032183.1 570 EKIVMGRFRS----PEKTQHWRTLFLSSGFSPITFSNFTESQAECLMKKTPVRGFQVEKRQCSLVLCWQRKELISASAWR 645
                  ****998877....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 647 aa     Download sequence    
MFRLFIISSR VVRFNFENQG YQNCIVKVLK YPDIDVLPSA NGRVFLEIRD NGPARFCRFG  60
YLVKSMLLTF DFEVKVVLNL ELLVPAGGAA GSTDTAGVVA VSGNNTNLCS EWRQDSTTST  120
SSNAGANCEL LPVPPSLQIG NISAPNTATA NTEKCSMDDW ESVLSESVAA SPSQEQSILR  180
WIMGDVEDPS MGSLNKVLQI VSGPMPPPPD FEFNGGFGVV DQTFGADPVG QFAFDSSQML  240
LNQNQSLHSP HPSFFMPLSY AQQPAPNLFL PPQAKRHNHG GAIGAIIDQL YKAAELVQTG  300
NPAPAQGILA RLNHQLSPIG KPFYRAAFYC KEALQLLLHT NDNANSTVTA SPFSLIFKIG  360
AYKAFSEISP VVQFANFTCN QALLEVFEGF DRIHIVDFDI GYGGQWASLM QELALRSIGT  420
PSLKITSFAS SSTHDQLELS LTRENLIQFA NEINIAFEFV VMSVDSLNSS SWSMPFHVPE  480
NEVVAVNLPV GSLASYQLSI PLILHFVKQL SPKIVVSVDR GCDRTDLPFP NHIIHALQSY  540
SNLLESLDAV NVNMDVLEKI ERLFLRSGIE KIVMGRFRSP EKTQHWRTLF LSSGFSPITF  600
SNFTESQAEC LMKKTPVRGF QVEKRQCSLV LCWQRKELIS ASAWRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-157GRAS family protein