PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu031720.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 365aa MW: 41423 Da PI: 7.045

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu031720.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.2	4.7e-41	108	227	2	129
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskk 99 +gkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LG+dk+skti+WL+ ++k+aikelt++ + +++ssss++n +s+ ++k++ + Oeu031720.1 108 TGKKDRHSKICTAQGIRDRRMRLSVQVARKFFDLQDMLGYDKASKTIDWLFAKSKKAIKELTKN--RPD----KVKSSSSVDNVKSDPHEKDDRNYIY 199 79************************************************************..222....2234444443334445555555555 PP TCP 100 sqksaasalnlakesrakarararertrek 129 + ++a +esr kararare+t k Oeu031720.1 200 KVVRKA--KPNTRESRDKARARAREKTMIK 227 555555..67788**********98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MFSSNDDPFD SLFKWSFTYD GNPISRQDNT SCFINFPSPF SDNHELPLNQ ILSQNQPMEG 60 TNTTNYKEGT EGNSEPCKLN ENSADQVHCE AITQVRKRNL GPTPRKRTGK KDRHSKICTA 120 QGIRDRRMRL SVQVARKFFD LQDMLGYDKA SKTIDWLFAK SKKAIKELTK NRPDKVKSSS 180 SVDNVKSDPH EKDDRNYIYK VVRKAKPNTR ESRDKARARA REKTMIKRLE NLSACQKSKP 240 NEFQELGFSA SPFEAVEESS SGDRKRDSPH YVDCHLFGNQ LDDEDTIEKL LGATTRLSSC 300 PISDYQCYDA AVSGCIDSDN NFMGLLGDCE MNNDMFNSNN SEMENMVSSA GNPTYFTSDF 360 LFQQ*

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MFSSNDDPFD SLFKWSFTYD GNPISRQDNT SCFINFPSPF SDNHELPLNQ ILSQNQPMEG  60
TNTTNYKEGT EGNSEPCKLN ENSADQVHCE AITQVRKRNL GPTPRKRTGK KDRHSKICTA  120
QGIRDRRMRL SVQVARKFFD LQDMLGYDKA SKTIDWLFAK SKKAIKELTK NRPDKVKSSS  180
SVDNVKSDPH EKDDRNYIYK VVRKAKPNTR ESRDKARARA REKTMIKRLE NLSACQKSKP  240
NEFQELGFSA SPFEAVEESS SGDRKRDSPH YVDCHLFGNQ LDDEDTIEKL LGATTRLSSC  300
PISDYQCYDA AVSGCIDSDN NFMGLLGDCE MNNDMFNSNN SEMENMVSSA GNPTYFTSDF  360
LFQQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	4e-32	TCP family protein