PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031344.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 337aa    MW: 36976.8 Da    PI: 5.741
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031344.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.67e-18246279134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C +C+ tkTp+WR gp g+k+LCnaCG++y++ +
  Oeu031344.1 246 CMHCQITKTPQWRAGPMGPKSLCNACGVRYKSGR 279
                  99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MTGPNCMDEN DCGNFFDQID DLIEFPPDNE YGDGNLIDSG DCKDIARIWN DPLPESDPLF  60
FNSQSNAITD LSAELCVPYE DIVQLEWLST FVEDSFSGAD LTLGKENLCV VKEPLHQQFL  120
NSSPVLVLEN SSSSSSSSCS VGKTMPLDMR RRGPHRARTK RSRPATFNPR AGIQLISPSS  180
SFETPQLFVT PVISSESEYF AESQPMEKIM KQVGAEQKKK RKIKSAVPVG PMEMNENPPA  240
QAVRKCMHCQ ITKTPQWRAG PMGPKSLCNA CGVRYKSGRL FPEYRPAASP TFVPSLHSNS  300
HKKVIEMRTN GGAGITAITP TTIKSESVSN TSLSCE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-42GATA family protein