PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu031198.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB_related | ||||||||
Protein Properties | Length: 160aa MW: 18197.4 Da PI: 6.5115 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.6 | 9.2e-16 | 10 | 54 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +teE l+ +++ +lG++ W++Ia++++ gRt++++k++w+++ Oeu031198.1 10 RGNYSTEEVHLIMELHDKLGNK-WSAIAAEFP-GRTGNDIKNYWHSH 54 899*******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MNYLKAGVKR GNYSTEEVHL IMELHDKLGN KWSAIAAEFP GRTGNDIKNY WHSHVKKRSK 60 SNVPQTRTMK QQPCDASSLS EILNEEQPNH VNYNLKIQKE SLSEDVVDAE PSCLQELENS 120 VPPFNNPNSV ARGITWDSME GNFWTEPMVI LSHQLVNYR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.2 | 8e-23 | MYB_related family protein |