PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu031183.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 369aa MW: 39830.9 Da PI: 10.0078

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu031183.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.1	3.3e-34	77	216	2	124
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....ssssasec.eaesssssasnsssg...... 88 g+kdrhsk+ T++g+RdRRvRls+++a+ f+dLqd+LG+d++sk++eWLl++a +i +l++ + + + +++++sss++n+++g Oeu031183.1 77 SGGKDRHSKVLTSKGPRDRRVRLSVNTAIHFYDLQDRLGYDQPSKAVEWLLKAAASSISKLPSIstafP--DTPKQlSDKKRSSSGGNDQQGfdsdev 172 689***********************************************************9944331..222224666666666666666788889 PP TCP 89 .......kaaksaakskksqksaasalnlak.esrakararare 124 + +++ +ks + + s l++++ + r kar+r + Oeu031183.1 173 dmdggggDPQQTVGMLSKSGTGKGSGLSVSRsKNRIKARERPQA 216 99999975555555888888888878888887888888888544 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MEADDIQNHG RKYPRISNGR IEFSKIGQKG DGLKYADEDD GETTRSRANG GGIDLGGALG 60 RFNCWPSSRI VRVSRASGGK DRHSKVLTSK GPRDRRVRLS VNTAIHFYDL QDRLGYDQPS 120 KAVEWLLKAA ASSISKLPSI STAFPDTPKQ LSDKKRSSSG GNDQQGFDSD EVDMDGGGGD 180 PQQTVGMLSK SGTGKGSGLS VSRSKNRIKA RERPQATRPG QIHLGKNPLS QPVCSQLFSV 240 SGDHQPELRH IPFVPEYFVS AVTAHNNNNN NNHNGADEYN LNFTISSSAT SSSLDGFNRG 300 TLQSNSSSPS LLPHLQRFPP IDGSPNFFIG TTASPVENHH QFLSGLDARL QLCYGDGGSH 360 SQKGKRKN*

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MEADDIQNHG RKYPRISNGR IEFSKIGQKG DGLKYADEDD GETTRSRANG GGIDLGGALG  60
RFNCWPSSRI VRVSRASGGK DRHSKVLTSK GPRDRRVRLS VNTAIHFYDL QDRLGYDQPS  120
KAVEWLLKAA ASSISKLPSI STAFPDTPKQ LSDKKRSSSG GNDQQGFDSD EVDMDGGGGD  180
PQQTVGMLSK SGTGKGSGLS VSRSKNRIKA RERPQATRPG QIHLGKNPLS QPVCSQLFSV  240
SGDHQPELRH IPFVPEYFVS AVTAHNNNNN NNHNGADEYN LNFTISSSAT SSSLDGFNRG  300
TLQSNSSSPS LLPHLQRFPP IDGSPNFFIG TTASPVENHH QFLSGLDARL QLCYGDGGSH  360
SQKGKRKN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	3e-39	TCP family protein