PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu030785.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 290aa    MW: 31959.9 Da    PI: 7.3843
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu030785.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26097.61.3e-304107199
       DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                  +C++C+vlr++C+++C+++p++      ++q++++ +++k++G++ +++l+ka pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++++q +q ++e
  Oeu030785.1   4 SCNGCRVLRKGCSENCTIRPCLqwiktSDSQANATVFLAKFYGRAGLMNLIKAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQFCQNAVE 101
                  6*********************9998777889*****************************************************************9 PP

       DUF260  94 lallke 99 
                  ++l+++
  Oeu030785.1 102 AVLRGD 107
                  988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MRMSCNGCRV LRKGCSENCT IRPCLQWIKT SDSQANATVF LAKFYGRAGL MNLIKAGPEH  60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQFCQNAV EAVLRGDPIT QIPTDLASEN  120
KNGPPLNAYD IRHVNKEENL SGSNDLHRVR TRCRFKRSSV RAKTKRVWAA GSGEESGHEE  180
VNRSPSHESS LSHQSGAAEP VLERESRERQ ESQESGSLVS GETAEADLFG RAQPTPEPAS  240
NDDEVAEMEL ELTLGTAPVK NNVKPKETQQ RKAADRVCRM ELELDLPAL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.16e-84LBD family protein